Detailed information NTG0827508

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SGW66_RS02180
• Genome accession: NZ_CP138669
• Coordinates: 388767..390041 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain DA70710
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 383767..395041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGW66_RS02155	hisS	384329..385591 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
SGW66_RS02160	aspS	385607..387373 (+)	1767	WP_000044803.1	aspartate--tRNA ligase	-
SGW66_RS02170	-	387705..387833 (+)	129	WP_001827648.1	hypothetical protein	-
SGW66_RS02175	-	387833..388606 (+)	774	WP_000682645.1	tRNA threonylcarbamoyladenosine dehydratase	-
SGW66_RS02180	rarA	388767..390041 (-)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
SGW66_RS02185	-	390126..390548 (+)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
SGW66_RS02190	-	390648..390830 (+)	183	WP_000752909.1	CsbD family protein	-
SGW66_RS02195	-	390870..391016 (+)	147	WP_000009238.1	SAS049 family protein	-
SGW66_RS02200	-	391253..392266 (-)	1014	WP_000985881.1	LLM class flavin-dependent oxidoreductase	-
SGW66_RS02205	-	392578..393720 (+)	1143	WP_029549205.1	cysteine desulfurase family protein	-
SGW66_RS02210	mnmA	393721..394839 (+)	1119	WP_000066103.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=827508 SGW66_RS02180 WP_000102740.1 388767..390041(-) (rarA) [Staphylococcus aureus strain DA70710]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=827508 SGW66_RS02180 WP_000102740.1 388767..390041(-) (rarA) [Staphylococcus aureus strain DA70710]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATAGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAATTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCCATCCGTGGTAGTGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGACCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686