Detailed information NTG0827418

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SGW60_RS01950
• Genome accession: NZ_CP138667
• Coordinates: 359963..361237 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain DA70900
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 354963..366237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGW60_RS01925	hisS	355524..356786 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
SGW60_RS01930	aspS	356802..358568 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
SGW60_RS01940	-	358901..359029 (+)	129	WP_001790559.1	hypothetical protein	-
SGW60_RS01945	-	359029..359802 (+)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
SGW60_RS01950	rarA	359963..361237 (-)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
SGW60_RS01955	-	361322..361744 (+)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
SGW60_RS01960	-	361844..362026 (+)	183	WP_000752909.1	CsbD family protein	-
SGW60_RS01965	-	362066..362212 (+)	147	WP_000009238.1	SAS049 family protein	-
SGW60_RS01970	-	362449..363462 (-)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
SGW60_RS01975	-	363774..364916 (+)	1143	WP_000409158.1	cysteine desulfurase family protein	-
SGW60_RS01980	mnmA	364917..366035 (+)	1119	WP_000066092.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=827418 SGW60_RS01950 WP_000102740.1 359963..361237(-) (rarA) [Staphylococcus aureus strain DA70900]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=827418 SGW60_RS01950 WP_000102740.1 359963..361237(-) (rarA) [Staphylococcus aureus strain DA70900]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686