Detailed information NTG0827017

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SGW65_RS07975
• Genome accession: NZ_CP138661
• Coordinates: 1647711..1648985 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain DA70870
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1642711..1653985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGW65_RS07945	mnmA	1642913..1644031 (-)	1119	WP_338427518.1	tRNA 2-thiouridine(34) synthase MnmA	-
SGW65_RS07950	-	1644032..1645174 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
SGW65_RS07955	-	1645486..1646499 (+)	1014	WP_000985886.1	LLM class flavin-dependent oxidoreductase	-
SGW65_RS07960	-	1646736..1646882 (-)	147	WP_000009238.1	SAS049 family protein	-
SGW65_RS07965	-	1646922..1647104 (-)	183	WP_000752913.1	CsbD family protein	-
SGW65_RS07970	-	1647204..1647626 (-)	423	WP_000704122.1	Rrf2 family transcriptional regulator	-
SGW65_RS07975	rarA	1647711..1648985 (+)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
SGW65_RS07980	-	1649146..1649919 (-)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
SGW65_RS07985	-	1649919..1650047 (-)	129	WP_001790559.1	hypothetical protein	-
SGW65_RS07995	aspS	1650380..1652146 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
SGW65_RS08000	hisS	1652162..1653424 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=827017 SGW65_RS07975 WP_000102735.1 1647711..1648985(+) (rarA) [Staphylococcus aureus strain DA70870]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=827017 SGW65_RS07975 WP_000102735.1 1647711..1648985(+) (rarA) [Staphylococcus aureus strain DA70870]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGACAAGGATGGTGACATG
CACTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTAAAAAACAAAATTTATTAC
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684