Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   R8507_RS06395 Genome accession   NZ_AP026925
Coordinates   1256317..1258065 (-) Length   582 a.a.
NCBI ID   WP_000828833.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700097     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1251317..1263065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8507_RS06350 (PC0094_12480) - 1251444..1252031 (-) 588 WP_000821289.1 CPBP family intramembrane glutamic endopeptidase -
  R8507_RS06355 - 1252034..1252267 (-) 234 Protein_1259 transcriptional regulator -
  R8507_RS06360 (PC0094_12500) - 1252280..1252660 (-) 381 WP_000566550.1 arsenate reductase family protein -
  R8507_RS06365 (PC0094_12510) - 1252653..1252976 (-) 324 WP_001812122.1 hypothetical protein -
  R8507_RS06370 (PC0094_12520) - 1252987..1253238 (-) 252 Protein_1262 replication initiator protein A -
  R8507_RS06375 (PC0094_12530) - 1253235..1253408 (-) 174 WP_001168349.1 hypothetical protein -
  R8507_RS06380 (PC0094_12540) rplL 1253607..1253975 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  R8507_RS06385 (PC0094_12550) rplJ 1254051..1254551 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  R8507_RS06390 (PC0094_12560) - 1254801..1256060 (-) 1260 WP_044812375.1 TRZ/ATZ family protein -
  R8507_RS06395 (PC0094_12570) rcrQ 1256317..1258065 (-) 1749 WP_000828833.1 ABC transporter ATP-binding protein Regulator
  R8507_RS06400 (PC0094_12580) - 1258067..1259791 (-) 1725 WP_044812378.1 ABC transporter ATP-binding protein -
  R8507_RS06405 (PC0094_12590) msrB 1259849..1260787 (-) 939 WP_044812379.1 peptide-methionine (R)-S-oxide reductase MsrB -
  R8507_RS06410 (PC0094_12600) - 1260854..1261006 (-) 153 WP_001812125.1 hypothetical protein -
  R8507_RS06415 (PC0094_12610) thrB 1261082..1261951 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64860.37 Da        Isoelectric Point: 7.3120

>NTDB_id=82690 R8507_RS06395 WP_000828833.1 1256317..1258065(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700097]
MKRQTVNQTLKRLAVDLANHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDIL
LDGQSIYDYTRASLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFVKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
QELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=82690 R8507_RS06395 WP_000828833.1 1256317..1258065(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700097]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGCCGTAGATTTAGCAAACCATCCCTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGGGAGCGAATCATCCATAAACTCCATCG
GTTACCGATTGCCTTTGTAGATAGGCAAGGTAGTGGAGAGATGGTTAGTCGTGTAACCACGGACATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAGATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAACCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAATGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACATGT
CTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATCTTG
CTGGATGGGCAATCCATTTATGATTATACACGAGCATCATTGAGACAGCAGTTTGGCATGGTGCTTCAAGAAACCTGGCT
CACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCAAAG
CAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTCTCT
GTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAACTTC
TTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGTAAAACTCATGAAGGGCCGCACAAGCTTCATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAACCAT
CAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(24-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.434

97.766

0.366

Multiple sequence alignment