Detailed information NTG0826529

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QA539_RS06595
• Genome accession: NZ_CP124591
• Coordinates: 1283149..1285542 (-)
• Length: 797 a.a.
• NCBI ID: WP_283721913.1
• Uniprot ID: -
• Organism: Macrococcus sp. CCM 8659
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1278149..1290542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA539_RS06575 (QA539_06555)	-	1279213..1279524 (-)	312	WP_099482913.1	DUF1292 domain-containing protein	-
QA539_RS06580 (QA539_06560)	ruvX	1279540..1279959 (-)	420	WP_219492272.1	Holliday junction resolvase RuvX	-
QA539_RS06585 (QA539_06565)	-	1279952..1280197 (-)	246	WP_241427516.1	IreB family regulatory phosphoprotein	-
QA539_RS06590 (QA539_06570)	alaS	1280277..1282901 (-)	2625	WP_419894996.1	alanine--tRNA ligase	-
QA539_RS06595 (QA539_06575)	recD2	1283149..1285542 (-)	2394	WP_283721913.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QA539_RS06600 (QA539_06580)	-	1285545..1286204 (-)	660	WP_219492277.1	tetratricopeptide repeat protein	-
QA539_RS06605 (QA539_06585)	mnmA	1286265..1287380 (-)	1116	WP_219492280.1	tRNA 2-thiouridine(34) synthase MnmA	-
QA539_RS06610 (QA539_06590)	-	1287392..1288519 (-)	1128	WP_101140268.1	cysteine desulfurase family protein	-
QA539_RS06615 (QA539_06595)	-	1288691..1289686 (+)	996	WP_419894997.1	LLM class flavin-dependent oxidoreductase	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 90179.56 Da
• Isoelectric Point: 4.5594

>NTDB_id=826529 QA539_RS06595 WP_283721913.1 1283149..1285542(-) (recD2) [Macrococcus sp. CCM 8659]
MENMTLFEQSFVKGTITRILFYNNDNFYTVLKAEVIESNEDFDDDATITGYLPQIAEGDTYTFTGKIVTHPKYGKQLQAD
KFEKDMPQSRDGIIHYLSSDLFKGVGKKTARTIVEVLGEDALNIILDDKSSLDQVPKLSDEKKELIYSTIHDNQAIEKIM
IRLNEFGFGPQLAMKIYQFYKDDTLKVINESPYQLVMDIEGIGFNKADELAGKLGIDNNHPERLKAALVFTIEQASNQNG
HTYIPDQVLLETSFNLLTKNGSKVNPDRLVIALTELTEEHKLVEHEKNIYIPSLFYSETKAVQILHRLMNHKDQVKQFEQ
SEVLMAIGDLETLFEVSYAERQKDALVTAMNAKLMILTGGPGTGKTTVVRGIVNLYAELHGLSLDYDDYDGQDYPIVVAA
PTGRASKRLQESTGLEATTIHRLIGWTKENKPDDVLETEITAKLVIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQL
PSVGPGQVFKDMIDAQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYNDRSFIPCSSNQIPDVIEKIVRSAVS
KGYDMRDIQVLVPIYRGPAGIRALNKVLQEILNPSDENKRELQFGDVCFRTGDKVLQLVNRPEDNVFNGDIGEVIGIFMA
AENALNKDVVIVDYDGSEVTYTKADLMEVTHAYCCSIHKSQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFCG
DIQAFNEGIKRIGNARFTSFYQFLIEYFKTDEADDTQHVNSDGNILPFNVGEMTEDNMHLVDPMINMEGITPYDFIS

Nucleotide

• Length: 2394 bp

>NTDB_id=826529 QA539_RS06595 WP_283721913.1 1283149..1285542(-) (recD2) [Macrococcus sp. CCM 8659]
TTGGAAAATATGACTTTGTTTGAGCAATCCTTTGTAAAAGGGACAATAACGAGAATATTATTTTATAACAATGATAATTT
CTATACTGTGCTGAAAGCTGAAGTGATTGAATCAAATGAAGATTTCGATGATGATGCTACGATTACAGGATACCTTCCGC
AAATTGCTGAAGGTGATACATATACTTTTACCGGTAAGATTGTAACGCATCCGAAGTACGGAAAGCAGCTACAGGCGGAT
AAATTCGAGAAGGATATGCCACAGTCGCGTGACGGTATTATTCATTATCTATCAAGTGATCTGTTTAAAGGAGTCGGTAA
GAAAACAGCGAGAACGATTGTAGAAGTACTTGGTGAAGATGCACTGAACATTATTCTTGATGATAAAAGTAGTCTTGACC
AGGTGCCGAAGTTATCAGATGAGAAGAAAGAATTAATCTATAGTACGATTCATGATAATCAGGCAATCGAGAAGATTATG
ATTCGACTGAATGAATTTGGTTTCGGGCCACAGCTTGCGATGAAGATTTATCAGTTCTATAAGGACGATACGCTAAAGGT
GATTAATGAATCCCCGTATCAACTCGTGATGGATATTGAAGGTATCGGATTTAATAAGGCGGATGAACTGGCAGGGAAAC
TCGGTATCGATAACAATCACCCAGAACGTCTGAAAGCAGCGCTCGTGTTTACGATAGAACAAGCCTCTAACCAGAATGGA
CATACATATATTCCAGACCAGGTATTACTTGAAACAAGCTTCAATCTACTGACGAAAAATGGCAGTAAAGTCAATCCTGA
TCGTCTCGTTATCGCACTCACTGAACTGACAGAGGAACATAAGCTCGTTGAACATGAGAAGAACATCTATATCCCGAGTC
TATTCTATTCTGAAACAAAAGCTGTACAAATATTGCATCGATTAATGAATCATAAGGATCAGGTGAAACAATTCGAACAG
TCAGAAGTGTTGATGGCAATTGGGGATCTGGAAACCTTGTTTGAAGTCAGCTATGCAGAACGTCAGAAAGATGCACTTGT
TACGGCGATGAACGCTAAGCTGATGATTCTAACGGGGGGTCCTGGTACAGGAAAGACAACGGTAGTGCGTGGTATTGTGA
ATTTATATGCCGAGCTGCATGGCTTAAGTCTCGATTATGATGACTACGACGGACAGGACTATCCTATTGTCGTCGCAGCA
CCAACTGGTCGTGCATCGAAGCGTCTTCAGGAATCGACAGGACTTGAAGCGACGACGATACACAGGTTAATTGGATGGAC
GAAAGAAAATAAACCGGACGATGTGCTGGAAACCGAAATTACAGCGAAACTGGTCATTATTGATGAAATGTCAATGGTTG
ATACGTGGCTCATGTTTCAATTGATGAAGGCTGTACCAAACGATGCCCAGATTATATTTGTCGGTGACCAGGACCAGCTC
CCATCGGTCGGTCCGGGGCAAGTATTTAAGGATATGATAGATGCACAAATTATGCCTCAGATTGAGTTGAACGAAGTGTA
CAGGCAGCAGGAAGGTTCATCAATCGTTGAACTTGCACACCAAATTAAGCGTAATGAACCATTTGATATTACGAAACGCT
ATAACGATAGAAGCTTTATCCCGTGCTCAAGCAATCAAATACCAGATGTGATTGAGAAAATTGTGCGTAGTGCTGTGAGT
AAAGGGTATGATATGCGTGACATACAAGTACTCGTACCGATATATAGAGGACCAGCAGGTATACGTGCGCTGAACAAAGT
GCTGCAGGAAATATTGAATCCAAGTGATGAAAACAAGCGTGAACTGCAGTTTGGAGATGTTTGTTTCAGAACGGGTGATA
AGGTTCTGCAGCTTGTCAATCGACCTGAAGATAACGTATTTAATGGTGATATCGGAGAAGTTATCGGCATCTTTATGGCA
GCTGAGAATGCATTAAACAAAGATGTTGTGATTGTTGACTATGATGGTAGTGAAGTAACGTATACGAAAGCAGATTTAAT
GGAAGTTACGCATGCATACTGCTGTTCTATTCATAAGTCTCAAGGTTCGGAATTTCCGATAGTAATCATGCCGGTTGTCA
ATCAGTACTACAGAATGCTGCAGAAGAATATACTATATACCGGATTAACGCGTGCGAAACAATCACTTATTTTTTGTGGA
GATATACAGGCTTTTAATGAAGGGATAAAGCGTATCGGTAACGCAAGGTTTACAAGCTTCTATCAGTTCCTTATCGAATA
TTTTAAGACAGATGAAGCGGATGATACACAGCATGTTAATTCAGATGGAAACATATTGCCATTCAATGTTGGTGAGATGA
CAGAAGACAATATGCATCTCGTTGATCCGATGATCAACATGGAAGGCATTACACCATATGATTTTATAAGTTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (584-653)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-718)

• AAA domain (AAA_30) (338-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.623	100	0.509