Detailed information NTG0826497

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QA540_RS06785
• Genome accession: NZ_CP124585
• Coordinates: 1298050..1300443 (-)
• Length: 797 a.a.
• NCBI ID: WP_420496057.1
• Uniprot ID: -
• Organism: Macrococcus psychrotolerans strain NRL/St 13/116
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1293050..1305443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QA540_RS06760 (QA540_06755)	-	1294114..1294425 (-)	312	WP_099482913.1	DUF1292 domain-containing protein	-
QA540_RS06765 (QA540_06760)	ruvX	1294441..1294860 (-)	420	WP_219492272.1	Holliday junction resolvase RuvX	-
QA540_RS06770 (QA540_06765)	-	1294853..1295098 (-)	246	WP_241427516.1	IreB family regulatory phosphoprotein	-
QA540_RS06775 (QA540_06770)	alaS	1295178..1297802 (-)	2625	WP_419894996.1	alanine--tRNA ligase	-
QA540_RS06780 (QA540_06775)	-	1297881..1298015 (+)	135	WP_256447881.1	hypothetical protein	-
QA540_RS06785 (QA540_06780)	recD2	1298050..1300443 (-)	2394	WP_420496057.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QA540_RS06790 (QA540_06785)	-	1300446..1301105 (-)	660	WP_219492277.1	tetratricopeptide repeat protein	-
QA540_RS06795 (QA540_06790)	mnmA	1301166..1302281 (-)	1116	WP_219492280.1	tRNA 2-thiouridine(34) synthase MnmA	-
QA540_RS06800 (QA540_06795)	-	1302293..1303420 (-)	1128	WP_219492282.1	cysteine desulfurase family protein	-
QA540_RS06805 (QA540_06800)	-	1303592..1304587 (+)	996	WP_420496058.1	LLM class flavin-dependent oxidoreductase	-
QA540_RS06810 (QA540_06805)	-	1304927..1305349 (-)	423	WP_012657169.1	cysteine metabolism transcriptional regulator CymR	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 90193.55 Da
• Isoelectric Point: 4.5402

>NTDB_id=826497 QA540_RS06785 WP_420496057.1 1298050..1300443(-) (recD2) [Macrococcus psychrotolerans strain NRL/St 13/116]
MENMTLFEQSFVKGTITRILFYNNDNFYTVLKAEVIESNEDFDDDATITGYLPQIAEGDTYTFTGKIVTHPKYGKQLQAD
KFEKDMPQSRDGIIHYLSSDLFKGVGKKTARTIVEVLGEDALNIILDDKSSLDQVPKLSDEKKELIYSTIHDNQAIEKIM
IRLNEFGFGPQLAMKIYQFYKDDTLKVINESPYQLVMDIEGIGFNKADELAGKLGIDNNHPERLKAALVFTIEQASNQNG
HTYIPDQVLLETSFNLLTKNGSQVNPDRLVIALTELTEEHKLVEHEKNIYIPSLFYSETKAVQILHRLMNHKDQVKQFEQ
SEVLMAIGDLETLFEVSYAERQKDALVTAMNAKLMILTGGPGTGKTTVVRGIVNLYAELHGLSLDYDDYDGQDYPIVVAA
PTGRASKRLQESTGLEATTIHRLIGWTKENKPDDVLETEITAKLVIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQL
PSVGPGQVFKDMIDAQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYNDRSFIPCSSNQIPDVIEKIVRSAVS
KGYDMRDIQVLVPIYRGPAGIRALNKVLQEILNPSDENKRELQFGDVCFRTGDKVLQLVNRPEDNVFNGDIGEVIGIFMA
AENALNKDVVIVDYDGSEVTYTKAELMEVTHAYCCSIHKSQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFCG
DIQAFNEGIKRIGNARFTSFYQFLIEYFKTDEADDTQHVNSDGNILPFNVGEMTEDNMHLVDPMINMEGITPYDFIS

Nucleotide

• Length: 2394 bp

>NTDB_id=826497 QA540_RS06785 WP_420496057.1 1298050..1300443(-) (recD2) [Macrococcus psychrotolerans strain NRL/St 13/116]
TTGGAAAATATGACTTTGTTTGAGCAATCCTTTGTAAAAGGGACAATAACGAGAATATTATTTTATAACAATGATAATTT
CTATACTGTGCTGAAAGCTGAAGTGATTGAATCAAATGAAGATTTCGATGATGATGCTACGATTACAGGATACCTTCCGC
AAATTGCTGAAGGTGATACATATACTTTTACCGGGAAGATTGTAACGCATCCGAAGTACGGAAAGCAGCTACAGGCGGAT
AAATTTGAGAAGGATATGCCACAGTCGCGTGACGGTATTATTCATTATCTATCAAGTGATCTGTTTAAAGGAGTCGGTAA
GAAAACAGCGAGAACGATTGTAGAAGTGCTTGGTGAAGATGCACTGAACATTATTCTTGATGATAAAAGTAGTCTTGACC
AGGTGCCTAAGTTATCAGATGAGAAGAAAGAATTAATCTATAGTACGATTCATGATAATCAGGCAATCGAGAAGATTATG
ATTCGACTGAATGAATTTGGCTTCGGGCCACAGCTTGCGATGAAGATTTATCAGTTCTATAAGGACGATACGCTGAAGGT
GATTAATGAATCCCCGTATCAACTCGTGATGGATATTGAAGGTATCGGATTTAATAAGGCGGATGAACTGGCAGGGAAAC
TCGGTATCGATAACAATCACCCAGAACGTCTGAAAGCAGCGCTCGTGTTTACGATAGAACAAGCCTCTAACCAGAATGGA
CATACATATATTCCGGACCAGGTATTACTTGAAACAAGCTTCAATCTACTGACGAAAAATGGCAGTCAAGTCAATCCTGA
TCGTCTCGTTATCGCACTCACTGAACTGACAGAGGAACATAAGCTCGTTGAACATGAGAAGAACATCTATATCCCGAGTC
TATTCTATTCTGAAACAAAAGCTGTACAAATATTGCATCGATTAATGAATCATAAGGATCAGGTGAAACAATTCGAACAG
TCAGAAGTGTTGATGGCAATTGGGGATCTGGAAACCTTGTTTGAAGTCAGCTATGCAGAACGTCAGAAAGATGCACTTGT
TACGGCGATGAACGCTAAGCTGATGATTCTAACGGGGGGTCCTGGTACAGGAAAGACAACGGTAGTGCGTGGTATTGTGA
ATTTATATGCCGAGCTGCATGGCTTAAGTCTCGATTATGATGACTATGACGGACAGGACTATCCTATTGTCGTCGCAGCA
CCAACTGGTCGTGCATCGAAGCGTCTTCAGGAATCGACAGGACTTGAAGCGACGACGATACACAGGTTAATTGGATGGAC
GAAAGAAAATAAACCGGACGATGTGCTGGAAACCGAAATTACAGCGAAACTGGTCATTATTGATGAAATGTCAATGGTTG
ATACGTGGCTCATGTTTCAATTGATGAAGGCTGTACCAAACGATGCCCAGATTATATTTGTCGGTGACCAGGACCAGCTC
CCATCGGTCGGTCCGGGGCAAGTATTTAAGGATATGATAGATGCACAAATTATGCCCCAGATTGAGTTGAACGAAGTGTA
CAGGCAGCAGGAAGGTTCATCAATCGTTGAACTTGCACACCAAATTAAGCGTAATGAACCATTTGATATTACGAAACGCT
ATAACGATAGAAGCTTTATCCCGTGCTCAAGCAATCAAATACCAGATGTGATTGAGAAAATTGTGCGTAGTGCTGTGAGT
AAAGGGTATGATATGCGTGACATACAAGTACTCGTACCGATATATAGAGGACCAGCAGGTATACGTGCGCTGAACAAAGT
GCTGCAGGAAATATTGAATCCAAGTGATGAAAACAAGCGTGAACTGCAGTTTGGAGATGTTTGTTTCAGAACGGGTGATA
AGGTTCTGCAGCTTGTCAATCGACCTGAAGATAACGTATTTAATGGTGATATCGGAGAAGTTATCGGCATCTTTATGGCA
GCTGAGAATGCATTAAACAAAGATGTTGTGATTGTTGACTATGATGGTAGTGAAGTAACGTATACGAAAGCAGAATTAAT
GGAAGTTACGCATGCATACTGCTGTTCTATTCATAAGTCTCAAGGTTCGGAATTTCCGATAGTAATCATGCCGGTTGTCA
ATCAGTACTACAGAATGCTGCAGAAGAATATACTATATACCGGATTAACGCGTGCGAAACAATCACTTATTTTTTGTGGA
GATATACAGGCTTTTAATGAAGGGATAAAGCGTATCGGTAACGCAAGGTTTACAAGCTTCTATCAGTTCCTTATCGAATA
TTTTAAGACAGACGAAGCGGATGATACACAGCATGTTAATTCAGATGGAAACATATTGCCATTCAATGTTGGTGAGATGA
CAGAAGACAATATGCATCTCGTTGATCCGATGATCAACATGGAGGGCATTACACCATATGATTTTATAAGTTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (338-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-718)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (584-653)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.499	100	0.508