Detailed information NTG0826374

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: QI031_RS14080
• Genome accession: NZ_CP124543
• Coordinates: 3223402..3224508 (+)
• Length: 368 a.a.
• NCBI ID: WP_281485746.1
• Uniprot ID: A0AAJ6NXF0
• Organism: Halotia branconii CENA392
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3218402..3229508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QI031_RS14060 (QI031_14060)	pyrR	3218735..3219271 (+)	537	WP_281485742.1	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	-
QI031_RS14065 (QI031_14065)	-	3219390..3220556 (+)	1167	WP_281485743.1	FIST N-terminal domain-containing protein	-
QI031_RS14070 (QI031_14070)	-	3220563..3221669 (+)	1107	WP_281485744.1	ATP-binding protein	-
QI031_RS14075 (QI031_14075)	-	3221950..3223251 (-)	1302	WP_281485745.1	sugar ABC transporter substrate-binding protein	-
QI031_RS14080 (QI031_14080)	pilM	3223402..3224508 (+)	1107	WP_281485746.1	type IV pilus biogenesis protein PilM	Machinery gene
QI031_RS14085 (QI031_14085)	-	3224513..3225283 (+)	771	WP_281485747.1	PilN domain-containing protein	-
QI031_RS14090 (QI031_14090)	-	3225280..3226041 (+)	762	WP_281485748.1	pilus assembly protein PilO	-
QI031_RS14095 (QI031_14095)	-	3226124..3226321 (-)	198	WP_281485749.1	hypothetical protein	-
QI031_RS14100 (QI031_14100)	-	3226465..3228906 (+)	2442	WP_281485750.1	AMIN domain-containing protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40246.25 Da
• Isoelectric Point: 4.4224

>NTDB_id=826374 QI031_RS14080 WP_281485746.1 3223402..3224508(+) (pilM) [Halotia branconii CENA392]
MVKSFNSLFGKSNKGVGIELAPERVNIVQLRKQRQGLKLESLTSIAVPEGVVTDGQITDPPAMAQLIQQGLAESKIKASR
VATGVPGRDAIVRLIPVPAELDDKELREMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVQVLLVATRKEVTDTY
ISTFEQAGLQIDVLEISSFALIRTIRDQLRQFGPQEAAVLVDIEFDSTEIAIVINGVPQFSRTVPIGTYQMQTALARAMS
LPTSRDMELLQGMTIPSTPIDGGKTGVTEINPGMAAVVRVLGELTDELRRSIDFYLNQSENLEVAQILLAGPGGGLQQLD
EFFTQRLSLPTIQIDPIGSLSLEVDQQKYPMLGRSGLAVVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=826374 QI031_RS14080 WP_281485746.1 3223402..3224508(+) (pilM) [Halotia branconii CENA392]
GTGGTGAAAAGCTTCAATAGTCTATTTGGCAAATCTAATAAAGGGGTGGGTATTGAACTTGCACCAGAACGGGTGAATAT
AGTTCAGCTACGCAAGCAGCGCCAAGGCTTGAAACTAGAGTCCTTGACATCAATAGCAGTTCCAGAAGGCGTTGTTACTG
ATGGTCAAATCACCGACCCCCCGGCAATGGCGCAATTAATCCAGCAAGGTCTGGCTGAGAGTAAAATCAAAGCCTCTCGT
GTGGCGACTGGTGTCCCAGGACGAGATGCAATTGTGCGTCTCATTCCTGTACCAGCCGAGTTAGATGACAAAGAACTGCG
AGAGATGGTGTTAAACCACGAAGCAGGTTTGTATTTACCTTATCCTCGTGAAGAAGCTGATGTAGATTATCAGAAACTTG
GGTATTTTGTAGATGAAGATGGCATCGAAAAAGTACAAGTACTACTAGTTGCCACCCGTAAGGAGGTGACAGATACATAT
ATTAGTACGTTTGAACAGGCAGGATTGCAAATTGACGTTTTAGAGATTAGCAGTTTTGCGCTGATTCGGACAATTCGCGA
CCAACTGCGGCAATTTGGACCACAAGAAGCAGCAGTGTTAGTTGATATTGAGTTTGATAGTACAGAAATTGCGATCGTCA
TTAATGGAGTACCGCAATTTTCCCGCACTGTACCTATTGGTACATATCAAATGCAAACAGCCTTGGCCAGAGCCATGAGT
TTACCGACATCACGAGATATGGAACTATTGCAGGGAATGACGATTCCTTCAACTCCTATTGATGGCGGCAAAACTGGGGT
TACTGAAATTAATCCTGGTATGGCTGCGGTGGTGAGAGTGTTAGGAGAACTCACAGATGAACTGCGCCGTTCCATCGATT
TTTACTTAAATCAAAGTGAAAATTTGGAAGTAGCACAGATTTTATTAGCTGGGCCAGGAGGTGGACTACAACAACTAGAT
GAGTTTTTTACTCAAAGATTAAGCTTGCCAACTATCCAAATAGATCCAATTGGGTCTTTGTCGTTGGAAGTTGATCAACA
AAAGTACCCCATGTTAGGACGTTCTGGCTTAGCAGTAGTACTTGGTCTAGGCATGAGGGAGGTTTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-367)

• Type IV pilus assembly protein PilM; (PilM_2) (17-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	67.03	99.728	0.668