Detailed information NTG0824693

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QJR43_RS07245
• Genome accession: NZ_CP124268
• Coordinates: 1475732..1478125 (-)
• Length: 797 a.a.
• NCBI ID: WP_003752581.1
• Uniprot ID: -
• Organism: Listeria seeligeri strain L140
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1470732..1483125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QJR43_RS07225 (QJR43_07210)	-	1471205..1471900 (-)	696	WP_003747793.1	ABC transporter ATP-binding protein	-
QJR43_RS07230 (QJR43_07215)	-	1471909..1473405 (-)	1497	WP_338649749.1	ABC transporter permease	-
QJR43_RS07235 (QJR43_07220)	pieR	1473572..1474258 (+)	687	WP_003747796.1	two component system response regulator PieR	-
QJR43_RS07240 (QJR43_07225)	pieS	1474255..1475694 (+)	1440	WP_078022713.1	two component system sensor histidine kinase PieS	-
QJR43_RS07245 (QJR43_07230)	recD2	1475732..1478125 (-)	2394	WP_003752581.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QJR43_RS07250 (QJR43_07235)	-	1478151..1478789 (-)	639	WP_139591419.1	tetratricopeptide repeat protein	-
QJR43_RS07255 (QJR43_07240)	-	1478832..1479572 (-)	741	WP_075702956.1	alpha/beta hydrolase	-
QJR43_RS07260 (QJR43_07245)	mnmA	1479691..1480806 (-)	1116	WP_075702955.1	tRNA 2-thiouridine(34) synthase MnmA	-
QJR43_RS07265 (QJR43_07250)	-	1480825..1481973 (-)	1149	WP_338649751.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89989.06 Da
• Isoelectric Point: 4.8108

>NTDB_id=824693 QJR43_RS07245 WP_003752581.1 1475732..1478125(-) (recD2) [Listeria seeligeri strain L140]
MAEQESLALFDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAKF
GQQFKAERFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITRILSDPSLLNTVPKLPSGAAESLLASLQEN
QGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFMLD
SVCMQQGHVYMEQEALLAEVTYLLEESEGVRIDQAILMEQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQT
EYQEQFPQSEFLLALGELEERIGVHYGDSQREALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDG
ATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQV
VLVGDQDQLPSVGPGQVLKDILHSKQIPTVALSDIYRQKDGSSIIEMAHNIKEGMLPANFTKNSADRSFFHCTVNQIGDV
VEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKNLQEIFNPNDTGRRKEVQFGELKYRVHDKVLQLINQPEKNVFNG
DIGEIVSIIYAKENTEKQDMIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTGV
TRSKQFLILCGEEEAFRMGVERVDENKRNTTLSERLTSEDVMLEQMTNKRILTVENIMEIDPMIGMEGITPDQFMAG

Nucleotide

• Length: 2394 bp

>NTDB_id=824693 QJR43_RS07245 WP_003752581.1 1475732..1478125(-) (recD2) [Listeria seeligeri strain L140]
ATGGCTGAACAAGAATCACTCGCCTTATTTGATACACCAGAAGAATTATTTATGAAGGGCACGATGCTGTCCACCATTTT
TTATAATGCCGAAAACCTCTTTTCTGTTGTGCGAATTCTTGTAAAAGAAACGAATGCAGACTGGGATGAAAAAGATATTA
TTGTGACTGGTTTTTTTCCGGCACTTCACGAACAAGAAGTTTATACTTTTTATGGAAAAATGCAAGAACATGCCAAATTT
GGTCAACAATTCAAAGCAGAGCGTTTTAGGAAAGAAATGCCACAATCACGTGCGGGCTTAATTAATTATTTATCTGGAGA
GCTTTTTAAAGGTATTGGTAAAGTAACCGCGGAAAATATTGTCGACACAATTGGCGATGATGCAATTACGCGAATCTTAT
CTGATCCGAGCTTATTAAATACGGTTCCAAAACTTCCATCAGGTGCGGCAGAGAGTTTGCTTGCTTCACTTCAAGAAAAT
CAAGGTTTAGAACATGTCATGGTGGGACTTAACGAATATGGATTCGGTCCGCAACTTTCCATGAAAATTTTTCAAGCTTA
TAAGCAAAATGCGATTGAAGTGTTAGAAAATAATCCTTATAAATTAATTGAAGACGTCAAAGGAATTGGTTTTCAACGTG
CGGATGAACTTGGTCGAAAACTTGGCCTCGGAGGAAACCATCCAGAGCGGCTTCGTGCCGGGATCTTATTTATGTTAGAT
TCGGTTTGTATGCAGCAAGGGCATGTTTATATGGAACAAGAAGCCTTACTTGCAGAAGTAACTTATTTACTGGAAGAGAG
TGAAGGGGTACGAATTGATCAAGCGATTTTAATGGAACAAGTCGAGAAACTCGCTGAAGAGCAAAAAATTATCACGGAAA
ATACACGTGTTTATATGCCGTCGCTTTATTATTCAGAAAGTGGTTTTGCTTATCATGTAAAAAGAATGCTTAAACAAACG
GAATACCAAGAACAATTTCCTCAGTCGGAATTTTTGCTCGCGCTCGGTGAATTAGAAGAGCGAATTGGCGTTCATTACGG
CGATTCCCAGCGTGAAGCCTTAGAACAAGCATTAATGTCACCAATGCTTGTGCTAACTGGTGGTCCTGGAACAGGGAAAA
CGACTGTTATTAAAGGAATTGTGGAATTATATGCAGAATTAAATGGTGTAAGTCTCGACCCACATGCCTATAAAGATGGA
GCGACTTTCCCAGTGTTATTAGCAGCTCCAACTGGAAGAGCGGCTAAACGGATGTCAGAATCTACAGGGCTTCCAGCAAT
GACTATTCACCGTTTGCTTGGTATGAATGGGCAGGAACAAATGGATGATGATGCGGAAAGATTAATTGATGGGCGACTTT
TAATTGTGGACGAAATGTCGATGGTTGATATTTGGCTTGCTAATCAGCTGTTTCGTGCATTACCAGCTCATATGCAAGTG
GTGTTAGTTGGCGACCAAGATCAGTTACCATCAGTCGGACCAGGGCAAGTTTTAAAAGATATCCTTCATTCGAAACAAAT
CCCAACCGTAGCACTTTCTGATATTTATCGGCAAAAAGATGGTTCTTCTATCATTGAAATGGCTCATAATATCAAAGAGG
GAATGCTCCCAGCCAATTTTACAAAAAACAGTGCTGATCGGTCGTTCTTTCATTGTACTGTGAACCAAATTGGCGATGTC
GTGGAACAAGTTGTAAAAAATGCTAAAAATAAAGGATTTCGAGCAAAAGACATCCAAGTGTTAGCACCAATGTATCGCGG
ACCAGCTGGAATTGATATTTTAAATAAAAATTTGCAAGAAATTTTCAATCCTAATGATACTGGCCGACGAAAAGAAGTGC
AATTTGGCGAATTAAAATATCGTGTCCATGACAAAGTGTTGCAATTAATTAATCAACCTGAAAAAAATGTCTTTAATGGT
GATATAGGAGAAATTGTCTCGATTATTTATGCCAAAGAAAATACGGAAAAACAAGATATGATTGTGGTGCAATTTGATCA
AACAGAAGTTTCTTATTACCGGCAAGAATTCAATCAATTGACTCATGCATACTGTTGTTCCATTCATAAAGCTCAGGGAA
GTGAGTTTCCTATTGTAATTATGCCGATTGTACGTAGTTATTACCGAATGCTTAGACGTGACCTGCTTTATACGGGAGTC
ACTCGAAGTAAACAATTTTTGATTCTTTGCGGAGAAGAAGAGGCGTTTCGGATGGGAGTGGAGCGGGTCGATGAAAATAA
ACGTAACACGACACTTTCAGAACGTTTAACTAGCGAAGATGTAATGCTAGAACAAATGACGAATAAACGAATATTAACGG
TTGAAAACATTATGGAGATTGACCCAATGATTGGAATGGAAGGAATAACACCAGATCAGTTTATGGCAGGTTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-665)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.995	98.871	0.573