Detailed information
Bioinformatically predicted
Overview
| Name | comGH | Type | Machinery gene |
| Locus tag | R8586_RS10315 | Genome accession | NZ_AP026922 |
| Coordinates | 1958510..1959463 (-) | Length | 317 a.a. |
| NCBI ID | WP_000345118.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700038 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1953510..1964463
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8586_RS10285 (PC0038_20210) | - | 1954271..1954894 (-) | 624 | WP_000932638.1 | hypothetical protein | - |
| R8586_RS10290 (PC0038_20220) | jag | 1954945..1955931 (-) | 987 | WP_000260014.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| R8586_RS10295 (PC0038_20230) | - | 1955950..1956774 (-) | 825 | WP_000727909.1 | membrane protein insertase YidC | - |
| R8586_RS10300 (PC0038_20240) | rnpA | 1956749..1957120 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| R8586_RS10305 | - | 1957137..1957268 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| R8586_RS10310 (PC0038_20250) | - | 1957269..1958459 (-) | 1191 | WP_000167769.1 | acetate kinase | - |
| R8586_RS10315 (PC0038_20260) | comGH | 1958510..1959463 (-) | 954 | WP_000345118.1 | class I SAM-dependent methyltransferase | Machinery gene |
| R8586_RS10320 | - | 1959809..1960610 (+) | 802 | WP_128887635.1 | IS5 family transposase | - |
| R8586_RS10325 (PC0038_20290) | - | 1960761..1961237 (+) | 477 | WP_000777686.1 | GNAT family N-acetyltransferase | - |
| R8586_RS10330 (PC0038_20300) | comGG/cglG | 1961911..1962303 (-) | 393 | WP_001818966.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| R8586_RS10335 (PC0038_20310) | comGF/cglF | 1962281..1962742 (-) | 462 | WP_000250537.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| R8586_RS10340 (PC0038_20320) | comGE/cglE | 1962705..1963007 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| R8586_RS10345 (PC0038_20330) | comGD/cglD | 1962970..1963374 (-) | 405 | WP_000588017.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| R8586_RS10350 (PC0038_20340) | comGC/cglC | 1963367..1963693 (-) | 327 | WP_000738625.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35699.89 Da Isoelectric Point: 4.2434
>NTDB_id=82358 R8586_RS10315 WP_000345118.1 1958510..1959463(-) (comGH) [Streptococcus pneumoniae strain PZ900700038]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLISLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLISLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=82358 R8586_RS10315 WP_000345118.1 1958510..1959463(-) (comGH) [Streptococcus pneumoniae strain PZ900700038]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGATCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGATCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGH | Streptococcus mutans UA140 |
54.952 |
98.738 |
0.543 |
| comGH | Streptococcus mutans UA159 |
54.633 |
98.738 |
0.539 |