Detailed information NTG0823484

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R6I06_RS14835
• Genome accession: NZ_CP137711
• Coordinates: 2783741..2785006 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis isolate FELIX_MS886
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2778741..2790006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6I06_RS14815 (R6I06_14815)	yrrB	2780112..2780732 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
R6I06_RS14820 (R6I06_14820)	mnmA	2780818..2781933 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
R6I06_RS14825 (R6I06_14825)	iscSA	2781964..2783103 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
R6I06_RS14830 (R6I06_14830)	cymR	2783122..2783538 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
R6I06_RS14835 (R6I06_14835)	rarA	2783741..2785006 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
R6I06_RS14840 (R6I06_14840)	tcdA	2785048..2785812 (-)	765	WP_009967893.1	ThiF family adenylyltransferase	-
R6I06_RS14850 (R6I06_14850)	aspS	2786148..2787926 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
R6I06_RS14855 (R6I06_14855)	hisS	2787940..2789214 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
R6I06_RS14860 (R6I06_14860)	yrzK	2789596..2789766 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=823484 R6I06_RS14835 WP_004398500.1 2783741..2785006(+) (rarA) [Bacillus subtilis isolate FELIX_MS886]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=823484 R6I06_RS14835 WP_004398500.1 2783741..2785006(+) (rarA) [Bacillus subtilis isolate FELIX_MS886]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1