Detailed information NTG0822849

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R6Y88_RS18175
• Genome accession: NZ_CP137687
• Coordinates: 3590243..3591508 (-)
• Length: 421 a.a.
• NCBI ID: WP_015483504.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YT-4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3585243..3596508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R6Y88_RS18150	yrzK	3585486..3585656 (+)	171	WP_004399157.1	YrzK family protein	-
R6Y88_RS18155	hisS	3586037..3587311 (+)	1275	WP_015384242.1	histidine--tRNA ligase	-
R6Y88_RS18160	aspS	3587325..3589103 (+)	1779	WP_015384241.1	aspartate--tRNA ligase	-
R6Y88_RS18170	tcdA	3589439..3590203 (+)	765	WP_015384240.1	ThiF family adenylyltransferase	-
R6Y88_RS18175	rarA	3590243..3591508 (-)	1266	WP_015483504.1	replication-associated recombination protein A	Machinery gene
R6Y88_RS18180	cymR	3591711..3592127 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
R6Y88_RS18185	iscSA	3592146..3593288 (+)	1143	WP_015384237.1	cysteine desulfurase family protein	-
R6Y88_RS18190	mnmA	3593316..3594431 (+)	1116	WP_015483502.1	tRNA 2-thiouridine(34) synthase MnmA	-
R6Y88_RS18195	yrrB	3594517..3595137 (+)	621	WP_206697897.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46486.28 Da
• Isoelectric Point: 7.0446

>NTDB_id=822849 R6Y88_RS18175 WP_015483504.1 3590243..3591508(-) (rarA) [Bacillus subtilis strain YT-4]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDNLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=822849 R6Y88_RS18175 WP_015483504.1 3590243..3591508(-) (rarA) [Bacillus subtilis strain YT-4]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATTGTAGCCCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTGGAAAACGGGATGATCATTTTGATCGGAGCAACCACAGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAGCCGTTAACACCCGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTCGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATACGTGGCTCTGATGCCAACGCTGCTCTCCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGGGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAATTTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995