Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QFX63_RS07545 Genome accession   NZ_CP123741
Coordinates   1586267..1586953 (-) Length   228 a.a.
NCBI ID   WP_001793467.1    Uniprot ID   A0A641AAY3
Organism   Staphylococcus aureus strain 2.2     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1581267..1591953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX63_RS07525 rpsT 1582181..1582432 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  QFX63_RS07530 holA 1582477..1583451 (-) 975 WP_001282568.1 DNA polymerase III subunit delta -
  QFX63_RS07535 comEC 1583508..1585709 (-) 2202 WP_001566670.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  QFX63_RS07540 - 1585714..1586175 (-) 462 WP_000439693.1 ComE operon protein 2 -
  QFX63_RS07545 comEA 1586267..1586953 (-) 687 WP_001793467.1 ComEA family DNA-binding protein Machinery gene
  QFX63_RS07550 - 1586993..1587709 (-) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  QFX63_RS07555 rsfS 1587712..1588065 (-) 354 WP_001088022.1 ribosome silencing factor -
  QFX63_RS07560 yqeK 1588066..1588650 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QFX63_RS07565 nadD 1588640..1589209 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QFX63_RS07570 yhbY 1589212..1589502 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  QFX63_RS07575 aroE 1589506..1590312 (-) 807 WP_000666748.1 shikimate dehydrogenase -
  QFX63_RS07580 yqeH 1590326..1591426 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25786.50 Da        Isoelectric Point: 9.6753

>NTDB_id=822104 QFX63_RS07545 WP_001793467.1 1586267..1586953(-) (comEA) [Staphylococcus aureus strain 2.2]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDNALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=822104 QFX63_RS07545 WP_001793467.1 1586267..1586953(-) (comEA) [Staphylococcus aureus strain 2.2]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATAATG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

100

100

1
  comEA Staphylococcus aureus N315

97.368

100

0.974