Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   R9C51_RS06745 Genome accession   NZ_AP026921
Coordinates   1307839..1309587 (-) Length   582 a.a.
NCBI ID   WP_044727560.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700027     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1302839..1314587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R9C51_RS06705 - 1303416..1303649 (-) 234 Protein_1329 transcriptional regulator -
  R9C51_RS06710 (PC0027_13230) - 1303662..1304042 (-) 381 WP_317825859.1 arsenate reductase family protein -
  R9C51_RS06715 (PC0027_13240) - 1304035..1304375 (-) 341 Protein_1331 hypothetical protein -
  R9C51_RS06720 (PC0027_13250) - 1304386..1304637 (-) 252 Protein_1332 replication initiator protein A -
  R9C51_RS06725 (PC0027_13260) - 1304637..1304807 (-) 171 WP_001168348.1 hypothetical protein -
  R9C51_RS06730 (PC0027_13270) rplL 1304994..1305362 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  R9C51_RS06735 (PC0027_13280) rplJ 1305438..1305938 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  R9C51_RS06740 (PC0027_13290) - 1306188..1307447 (-) 1260 WP_000862486.1 TRZ/ATZ family protein -
  R9C51_RS06745 (PC0027_13300) rcrQ 1307839..1309587 (-) 1749 WP_044727560.1 ABC transporter ATP-binding protein Regulator
  R9C51_RS06750 (PC0027_13310) - 1309589..1311313 (-) 1725 WP_317825871.1 ABC transporter ATP-binding protein -
  R9C51_RS06755 (PC0027_13320) msrB 1311371..1312309 (-) 939 WP_000818207.1 peptide-methionine (R)-S-oxide reductase MsrB -
  R9C51_RS06760 (PC0027_13330) - 1312376..1312528 (-) 153 WP_001822048.1 hypothetical protein -
  R9C51_RS06765 (PC0027_13340) thrB 1312604..1313473 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64886.41 Da        Isoelectric Point: 7.6282

>NTDB_id=82206 R9C51_RS06745 WP_044727560.1 1307839..1309587(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700027]
MKRQTVNQTLKRLVVDLANHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRNLRERIIHKLHRLPIAFADRQGNGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDIL
LDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
QELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=82206 R9C51_RS06745 WP_044727560.1 1307839..1309587(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700027]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGTCGTAGATTTAGCAAACCATCCCTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAAATTTACGAGAGCGAATCATCCATAAACTCCATCG
ATTACCGATTGCTTTTGCGGATCGGCAAGGCAATGGAGAGATGGTCAGTCGTGTAACCACGGATATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAGATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACCCAGTTGATTGAAGAATCGCTTAGCCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAACCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAACGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACATGT
CTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATCTTG
CTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTGGCT
CACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCAAAG
CAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTCTCT
GTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAACTTC
TTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGTTTCATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAACCAT
CAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(24-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.544

96.564

0.363