Detailed information NTG0821453

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QFB80_RS10230
• Genome accession: NZ_CP123596
• Coordinates: 2233204..2234313 (-)
• Length: 369 a.a.
• NCBI ID: WP_065083114.1
• Uniprot ID: -
• Organism: Elizabethkingia miricola strain MEYL_1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2228204..2239313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QFB80_RS10205 (QFB80_10205)	-	2229466..2230197 (+)	732	WP_086979181.1	DNA alkylation repair protein	-
QFB80_RS10210 (QFB80_10210)	-	2230194..2230574 (-)	381	WP_078794172.1	group III truncated hemoglobin	-
QFB80_RS10215 (QFB80_10215)	-	2230668..2231159 (+)	492	WP_065083113.1	YkgJ family cysteine cluster protein	-
QFB80_RS10220 (QFB80_10220)	-	2231286..2231564 (+)	279	WP_059154429.1	hypothetical protein	-
QFB80_RS10225 (QFB80_10225)	gdhA	2231654..2233018 (-)	1365	WP_059154430.1	NADP-specific glutamate dehydrogenase	-
QFB80_RS10230 (QFB80_10230)	dprA	2233204..2234313 (-)	1110	WP_065083114.1	DNA-processing protein DprA	Machinery gene
QFB80_RS10235 (QFB80_10235)	-	2234351..2235118 (-)	768	WP_086979184.1	rhomboid family intramembrane serine protease	-
QFB80_RS10240 (QFB80_10240)	-	2235286..2236407 (+)	1122	WP_065083115.1	DUF3078 domain-containing protein	-
QFB80_RS10245 (QFB80_10245)	-	2236414..2237946 (-)	1533	WP_086979186.1	YifB family Mg chelatase-like AAA ATPase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41292.10 Da
• Isoelectric Point: 6.4992

>NTDB_id=821453 QFB80_RS10230 WP_065083114.1 2233204..2234313(-) (dprA) [Elizabethkingia miricola strain MEYL_1]
MFSEEHLYSIALRHCPQIGDLYFKKIVNTTGSAQKAWNLHKHELIKLYGIGNKIAEDIGKDSHLQFAETELEFCYKNNIQ
ILLSHQGNSPGLLNECDDAPAILYQKGKFDYQRTNISIVGTRKSSKYGKEFITEFLYSLKDNNIQTVSGLAVGTDAYTHE
ESLKNHVPTVAVLAHGFHMLYPDKNRKLADKILEQNGCLFTEFNSSQPPIRESFIQRNRIIAGISPTTIITETAYGGGSV
STANYANIYNREVLALPGPIEDKYSQGCNLLISQNKARIIVSIPDTIDYLGLLVKPVEQLPLFHEKEIPANLTSEQQLIL
SVITDSPNINPDEIAEKVSLPVYKILPLILDLELLGHIKASSGRQYYPS

Nucleotide

• Length: 1110 bp

>NTDB_id=821453 QFB80_RS10230 WP_065083114.1 2233204..2234313(-) (dprA) [Elizabethkingia miricola strain MEYL_1]
ATGTTTTCCGAAGAGCATCTTTATTCCATAGCGTTAAGACATTGCCCGCAGATCGGTGATTTATACTTCAAGAAAATAGT
CAATACAACAGGCTCCGCTCAAAAAGCATGGAACCTGCACAAACATGAGCTGATAAAATTATATGGTATTGGAAACAAAA
TAGCGGAAGATATAGGAAAAGATTCTCATTTACAATTCGCCGAAACAGAACTAGAATTCTGCTATAAGAATAACATTCAG
ATTTTACTTTCTCATCAGGGAAATTCCCCAGGATTATTAAACGAGTGCGACGATGCACCGGCGATACTCTATCAGAAAGG
AAAATTTGATTACCAAAGGACAAATATTAGTATAGTAGGCACAAGAAAAAGCTCGAAGTATGGTAAAGAGTTTATTACTG
AATTTCTGTACTCTCTAAAAGATAACAATATCCAAACAGTTAGCGGACTTGCTGTGGGTACAGATGCTTATACACACGAA
GAATCTTTAAAAAATCACGTCCCCACTGTCGCAGTATTAGCACATGGTTTTCATATGCTGTATCCTGACAAAAACAGAAA
ATTAGCTGATAAAATTCTGGAACAAAACGGCTGTCTTTTTACAGAATTCAATTCATCACAACCACCGATAAGAGAAAGTT
TTATTCAGAGAAACAGAATTATTGCCGGTATATCACCCACTACCATCATAACAGAAACAGCTTATGGCGGAGGTTCTGTA
AGTACTGCTAATTATGCCAATATATATAACCGTGAAGTACTGGCTCTTCCGGGGCCAATTGAAGATAAATACAGCCAGGG
ATGCAACCTTTTGATTTCACAAAACAAAGCAAGAATTATTGTTTCCATTCCTGATACGATTGACTATTTGGGACTTCTTG
TCAAACCCGTGGAACAGCTCCCTCTATTTCACGAAAAAGAGATCCCAGCGAACCTTACATCGGAGCAACAACTGATCCTA
TCTGTTATTACAGATTCCCCTAATATAAATCCGGATGAAATTGCCGAAAAAGTATCTCTCCCGGTTTATAAAATTTTACC
CCTAATATTAGATCTGGAACTTTTGGGGCACATTAAAGCCTCTTCCGGGAGACAATATTACCCAAGCTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-280)

• DprA winged helix domain (DprA_WH) (309-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	50.82	99.187	0.504