Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   R8566_RS06680 Genome accession   NZ_AP026920
Coordinates   1320125..1321876 (-) Length   583 a.a.
NCBI ID   WP_000828844.1    Uniprot ID   A0A0H2ZNQ2
Organism   Streptococcus pneumoniae strain PZ900700014     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1315125..1326876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8566_RS06655 (PC0014_13260) - 1315298..1316107 (-) 810 WP_000926537.1 MurR/RpiR family transcriptional regulator -
  R8566_RS06660 (PC0014_13270) - 1316506..1317093 (-) 588 WP_000821277.1 CPBP family intramembrane glutamic endopeptidase -
  R8566_RS06665 (PC0014_13280) rplL 1317280..1317648 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  R8566_RS06670 (PC0014_13290) rplJ 1317724..1318224 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  R8566_RS06675 (PC0014_13300) - 1318474..1319733 (-) 1260 WP_000862488.1 TRZ/ATZ family protein -
  R8566_RS06680 (PC0014_13310) rcrQ 1320125..1321876 (-) 1752 WP_000828844.1 ABC transporter ATP-binding protein Regulator
  R8566_RS06685 (PC0014_13320) - 1321878..1323602 (-) 1725 WP_000681702.1 ABC transporter ATP-binding protein -
  R8566_RS06690 (PC0014_13330) msrB 1323660..1324598 (-) 939 WP_000818203.1 peptide-methionine (R)-S-oxide reductase MsrB -
  R8566_RS06695 (PC0014_13340) - 1324665..1324817 (-) 153 WP_050078116.1 hypothetical protein -
  R8566_RS06700 (PC0014_13350) thrB 1324893..1325762 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 583 a.a.        Molecular weight: 64876.41 Da        Isoelectric Point: 7.3119

>NTDB_id=82085 R8566_RS06680 WP_000828844.1 1320125..1321876(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700014]
MKRQTVNQTLKRLAVDLASHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKKSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSALTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDI
LLDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESL
SVGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGN
HQELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1752 bp        

>NTDB_id=82085 R8566_RS06680 WP_000828844.1 1320125..1321876(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700014]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGCCGTAGATTTAGCAAGCCATCCTTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCTCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGGGAGCGAATCATCCATAAGCTCCATCG
TTTACCGATTGCCTTTGTAGATAGGCAAGGTAGTGGAGAGATGGTTAGTCGTGTAACCACGGACATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTCAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAAATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGTCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAGCCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAACGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACA
TGTCTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCA
TCGTTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATC
TTGCTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTG
GCTCACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCA
AAGCAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTC
TCTGTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAAC
TTCTTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGTTTCATCA
TTGCTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAAC
CATCAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(24-295)

ABC transporter (ABC_tran)

(360-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZNQ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.544

97.77

0.367