Detailed information NTG0820149

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R4701_RS07730
• Genome accession: NZ_CP137114
• Coordinates: 1500819..1502090 (-)
• Length: 423 a.a.
• NCBI ID: WP_317805887.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 15P3054
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1495819..1507090

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4701_RS07710	-	1496408..1497298 (+)	891	WP_000797963.1	carbohydrate ABC transporter permease	-
R4701_RS07715	-	1497327..1498943 (+)	1617	WP_000669745.1	ABC transporter substrate-binding protein	-
R4701_RS07720	-	1498953..1500272 (+)	1320	WP_000502552.1	glycoside hydrolase family 32 protein	-
R4701_RS07730	rarA	1500819..1502090 (-)	1272	WP_317805887.1	replication-associated recombination protein A	Machinery gene
R4701_RS07735	-	1502360..1502599 (+)	240	WP_000818078.1	hypothetical protein	-
R4701_RS07740	-	1502764..1502943 (+)	180	WP_001048906.1	hypothetical protein	-
R4701_RS07745	-	1503069..1503248 (+)	180	WP_001132284.1	type II toxin-antitoxin system HicA family toxin	-
R4701_RS07750	-	1503285..1503737 (+)	453	WP_000961810.1	type II toxin-antitoxin system HicB family antitoxin	-
R4701_RS07755	-	1504028..1504498 (+)	471	WP_000257089.1	DUF3013 family protein	-
R4701_RS07760	-	1504517..1505584 (+)	1068	WP_000719721.1	site-2 protease family protein	-
R4701_RS07765	-	1505586..1506014 (+)	429	WP_000401989.1	NUDIX hydrolase	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46922.29 Da
• Isoelectric Point: 5.9132

>NTDB_id=820149 R4701_RS07730 WP_317805887.1 1500819..1502090(-) (rarA) [Streptococcus pneumoniae strain 15P3054]
MPDNLALRMRPKTIDQVIGQDHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGTRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKASGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDHLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=820149 R4701_RS07730 WP_317805887.1 1500819..1502090(-) (rarA) [Streptococcus pneumoniae strain 15P3054]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGATCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCGGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGAGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTGAAAATCCTTTCTTTTCCG
TCACTCCTGCCATTCGTAGCCGTGTTCAAATTTTTGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTGGCTGTTCTCTCTACCCCTGAGAATGACGAGGGCACTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATCCGTGGCTCAGATGTGGATGCCAGTCTCCACTATGCTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGTTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCACAAAGGATTGGTTTCCCAGAAGCCCGCATTCTCATCGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAGCATCAGG
GCACTTGCCTATTCCGCGACACCTGCGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTCAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCATTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	58.68	96.69	0.567