Detailed information NTG0819961

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R4707_RS03260
• Genome accession: NZ_CP137113
• Coordinates: 622137..623408 (+)
• Length: 423 a.a.
• NCBI ID: WP_001113212.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain ZGX
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 617137..628408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4707_RS03230	-	618198..618626 (-)	429	WP_000401987.1	NUDIX hydrolase	-
R4707_RS03235	-	618628..619695 (-)	1068	WP_000719703.1	site-2 protease family protein	-
R4707_RS03240	-	619714..620184 (-)	471	WP_000257085.1	DUF3013 family protein	-
R4707_RS03245	-	620475..620928 (-)	454	Protein_642	type II toxin-antitoxin system HicB family antitoxin	-
R4707_RS03250	-	620965..621143 (-)	179	Protein_643	type II toxin-antitoxin system HicA family toxin	-
R4707_RS03255	-	621624..621845 (-)	222	WP_000425689.1	hypothetical protein	-
R4707_RS03260	rarA	622137..623408 (+)	1272	WP_001113212.1	replication-associated recombination protein A	Machinery gene
R4707_RS03270	-	623953..625272 (-)	1320	WP_001864898.1	glycoside hydrolase family 32 protein	-
R4707_RS03275	-	625282..626127 (-)	846	WP_000819519.1	carbohydrate ABC transporter permease	-
R4707_RS03280	-	626129..627031 (-)	903	WP_000032529.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 47013.48 Da
• Isoelectric Point: 5.9471

>NTDB_id=819961 R4707_RS03260 WP_001113212.1 622137..623408(+) (rarA) [Streptococcus pneumoniae strain ZGX]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYTARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWIKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDRLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=819961 R4707_RS03260 WP_001113212.1 622137..623408(+) (rarA) [Streptococcus pneumoniae strain ZGX]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCTGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTGAAAATCCTTTCTTCTCTG
TCACTCCTGCCATTCGTAGCCGAGTTCAAATTTTCGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTAGCTGTTCTCTCTACCCCTGAGAATGACGAGGGCATTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATTCGTGGCTCAGATGTGGATGCCAGTCTCCACTATACTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGCTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCCCAGAAGATTGGGTTCCCAGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTGCGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGATCAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGATCGTTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	57.279	99.054	0.567