Detailed information NTG0819844

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R4700_RS03055
• Genome accession: NZ_CP137112
• Coordinates: 609913..611184 (+)
• Length: 423 a.a.
• NCBI ID: WP_277770833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 02H2025
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 604913..616184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4700_RS03025	-	605786..606256 (-)	471	WP_000257093.1	DUF3013 family protein	-
R4700_RS03030	-	606547..606999 (-)	453	WP_000961810.1	type II toxin-antitoxin system HicB family antitoxin	-
R4700_RS03035	-	607036..607215 (-)	180	WP_001132282.1	type II toxin-antitoxin system HicA family toxin	-
R4700_RS03040	-	607352..607531 (-)	180	WP_001048906.1	hypothetical protein	-
R4700_RS03045	-	607810..609156 (-)	1347	WP_001808790.1	IS1380-like element ISSpn5 family transposase	-
R4700_RS03050	-	609443..609643 (-)	201	WP_000818077.1	hypothetical protein	-
R4700_RS03055	rarA	609913..611184 (+)	1272	WP_277770833.1	replication-associated recombination protein A	Machinery gene
R4700_RS03065	-	611731..613050 (-)	1320	WP_000502537.1	glycoside hydrolase family 32 protein	-
R4700_RS03070	-	613060..614676 (-)	1617	WP_000669751.1	ABC transporter substrate-binding protein	-
R4700_RS03075	-	614705..615595 (-)	891	WP_000797961.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46998.51 Da
• Isoelectric Point: 6.2424

>NTDB_id=819844 R4700_RS03055 WP_277770833.1 609913..611184(+) (rarA) [Streptococcus pneumoniae strain 02H2025]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTKNPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYTARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDRLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=819844 R4700_RS03055 WP_277770833.1 609913..611184(+) (rarA) [Streptococcus pneumoniae strain 02H2025]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCTGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTAAAAATCCTTTCTTCTCTG
TCACTCCTGCCATTCGTAGCCGAGTTCAAATTTTCGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTAGCTGTTCTCTCTACCCCTGAGAATGACGAGGGCATTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATTCGTGGCTCAGATGTGGATGCCAGTCTCCACTATACTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGCTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCCCAGAAGATTGGGTTCCCAGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTACGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTCAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCGTTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	57.518	99.054	0.57