Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   R4712_RS09135 Genome accession   NZ_CP137110
Coordinates   1757274..1757909 (+) Length   211 a.a.
NCBI ID   WP_102085781.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 16H2041     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1752274..1762909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4712_RS09125 amiA 1754098..1756056 (+) 1959 WP_044791661.1 peptide ABC transporter substrate-binding protein Regulator
  R4712_RS09130 - 1756228..1757163 (+) 936 WP_044791662.1 ABC transporter ATP-binding protein -
  R4712_RS09135 rcrP 1757274..1757909 (+) 636 WP_102085781.1 ATP-binding cassette domain-containing protein Regulator
  R4712_RS09140 - 1758067..1759161 (+) 1095 WP_000031963.1 cystathionine gamma-synthase -
  R4712_RS09145 - 1759169..1760335 (+) 1167 WP_000521384.1 MalY/PatB family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23831.20 Da        Isoelectric Point: 4.6782

>NTDB_id=819683 R4712_RS09135 WP_102085781.1 1757274..1757909(+) (rcrP) [Streptococcus pneumoniae strain 16H2041]
MAFVGPSGSGKSTIVRLLEQFYKPLAGDILMEQSSIYDFNLKEWRSKIAWVSQNNAVLSGSIRDNLCLGLNRLVTDDELM
RVLDLVSLGDEIRSMKEGLDTEVGERGRFLSGGQSQRLQIARTYLKDAEILIFDEFTANLDADSEYAIISILYSALKEKT
VVIIAHRLSTVKDVDCIFFLEEGKITGSGTHKELLENHERYARFVQEQMIE

Nucleotide


Download         Length: 636 bp        

>NTDB_id=819683 R4712_RS09135 WP_102085781.1 1757274..1757909(+) (rcrP) [Streptococcus pneumoniae strain 16H2041]
ATTGCTTTTGTTGGACCATCTGGATCAGGAAAATCAACGATTGTGCGTTTGTTAGAGCAGTTTTATAAACCGCTTGCAGG
AGATATTCTAATGGAGCAATCAAGTATATATGATTTTAACTTAAAAGAATGGAGAAGTAAAATCGCTTGGGTTTCACAAA
ATAATGCAGTCTTATCTGGCAGTATTCGTGACAATCTTTGTCTCGGTTTGAATCGCTTAGTAACTGATGATGAATTGATG
AGAGTGCTAGACTTAGTATCACTAGGTGATGAGATTCGCTCCATGAAAGAGGGACTAGATACTGAAGTTGGTGAACGCGG
ACGATTCTTGTCAGGGGGGCAAAGCCAAAGACTTCAAATAGCTAGAACCTACTTAAAAGATGCTGAAATTCTTATATTTG
ATGAATTCACTGCTAATCTTGATGCGGATTCTGAGTATGCGATTATCAGTATCCTCTATTCTGCATTAAAGGAGAAGACG
GTTGTGATTATAGCGCATCGTTTGTCAACGGTAAAAGATGTGGATTGTATTTTCTTCTTAGAGGAGGGGAAAATCACTGG
CTCAGGAACTCATAAGGAACTACTGGAAAATCATGAGCGTTATGCTCGTTTTGTGCAGGAGCAAATGATAGAGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(2-138)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

36.967

100

0.37