Detailed information NTG0818992

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R4699_RS01100
• Genome accession: NZ_CP137105
• Coordinates: 191708..192979 (-)
• Length: 423 a.a.
• NCBI ID: WP_050104797.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16H2092
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 186708..197979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4699_RS01075	-	187820..189139 (+)	1320	WP_000502560.1	glycoside hydrolase family 32 protein	-
R4699_RS01080	-	189659..190039 (+)	381	WP_224782904.1	hypothetical protein	-
R4699_RS01085	-	190436..191011 (+)	576	WP_277778044.1	hypothetical protein	-
R4699_RS01090	-	191130..191288 (+)	159	Protein_195	site-specific integrase	-
R4699_RS01100	rarA	191708..192979 (-)	1272	WP_050104797.1	replication-associated recombination protein A	Machinery gene
R4699_RS01105	-	193249..193488 (+)	240	WP_000818079.1	hypothetical protein	-
R4699_RS01110	-	193653..193832 (+)	180	WP_001809903.1	hypothetical protein	-
R4699_RS01115	-	193969..194148 (+)	180	WP_001132276.1	type II toxin-antitoxin system HicA family toxin	-
R4699_RS01120	-	194185..194637 (+)	453	WP_000961810.1	type II toxin-antitoxin system HicB family antitoxin	-
R4699_RS01125	-	194928..195398 (+)	471	WP_000257089.1	DUF3013 family protein	-
R4699_RS01130	-	195417..196484 (+)	1068	WP_000719721.1	site-2 protease family protein	-
R4699_RS01135	-	196486..196914 (+)	429	WP_000401988.1	NUDIX hydrolase	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 47000.42 Da
• Isoelectric Point: 5.9140

>NTDB_id=818992 R4699_RS01100 WP_050104797.1 191708..192979(-) (rarA) [Streptococcus pneumoniae strain 16H2092]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIHHITLDIMENSLQRSYITMDKDGDGHY
DALSALQKSIRGSDVDASLHYTARLIEAGDMPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNTQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDRLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=818992 R4699_RS01100 WP_050104797.1 191708..192979(-) (rarA) [Streptococcus pneumoniae strain 16H2092]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCGGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACAACTGAAAATCCTTTCTTTTCCG
TCACTCCTGCCATTCGTAGCCGTGTTCAAATTTTTGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTGGCTGTTCTCTCTACCCCTGAGAATGACGAGGGCATTC
ACCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGCTCTATCTGCCCTGCAAAAGTCTATTCGTGGCTCAGATGTGGATGCCAGTCTCCACTATACTGCCCGCTTGATTGA
GGCTGGGGATATGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGCTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCCCAGAAGATTGGGTTCCCAGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTGCGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATACCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTCAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCGTTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	57.041	99.054	0.565