Detailed information NTG0818534

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R4710_RS03155
• Genome accession: NZ_CP137101
• Coordinates: 609756..611027 (+)
• Length: 423 a.a.
• NCBI ID: WP_001113213.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16P2012-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 604756..616027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4710_RS03120	-	605821..606249 (-)	429	WP_000418168.1	NUDIX hydrolase	-
R4710_RS03125	-	606230..607318 (-)	1089	WP_000719722.1	site-2 protease family protein	-
R4710_RS03130	-	607337..607807 (-)	471	WP_000257107.1	DUF3013 family protein	-
R4710_RS03135	-	608098..608550 (-)	453	WP_000961810.1	type II toxin-antitoxin system HicB family antitoxin	-
R4710_RS03140	-	608587..608766 (-)	180	WP_001132285.1	type II toxin-antitoxin system HicA family toxin	-
R4710_RS03145	-	608903..609082 (-)	180	WP_001048906.1	hypothetical protein	-
R4710_RS03150	-	609247..609486 (-)	240	WP_000818079.1	hypothetical protein	-
R4710_RS03155	rarA	609756..611027 (+)	1272	WP_001113213.1	replication-associated recombination protein A	Machinery gene
R4710_RS03165	-	611576..612895 (-)	1320	WP_050245222.1	glycoside hydrolase family 32 protein	-
R4710_RS03170	-	612905..613750 (-)	846	WP_000819520.1	carbohydrate ABC transporter permease	-
R4710_RS03175	-	613752..614654 (-)	903	WP_000032533.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46980.41 Da
• Isoelectric Point: 5.9140

>NTDB_id=818534 R4710_RS03155 WP_001113213.1 609756..611027(+) (rarA) [Streptococcus pneumoniae strain 16P2012-2]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYTARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDHLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=818534 R4710_RS03155 WP_001113213.1 609756..611027(+) (rarA) [Streptococcus pneumoniae strain 16P2012-2]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCTGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTGAAAATCCTTTCTTTTCCG
TCACTCCTGCCATTCGTAGCCGTGTTCAAATTTTTGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTGGCTGTTCTCTCTACCCCTGAGAATGACGAGGGCATTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATCCGTGGCTCAGATGTGGATGCCAGTCTCCACTATACTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGCTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCCCAGAAGATTGGGTTCCCAGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTACGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTAAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCATTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	58.191	96.69	0.563