Detailed information NTG0818409

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R4703_RS03160
• Genome accession: NZ_CP137100
• Coordinates: 593650..594921 (+)
• Length: 423 a.a.
• NCBI ID: WP_023396414.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain LYP
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 588650..599921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4703_RS03120	-	589679..590152 (-)	474	WP_023396410.1	GNAT family N-acetyltransferase	-
R4703_RS03125	-	590149..590583 (-)	435	WP_000421871.1	NUDIX hydrolase	-
R4703_RS03130	-	590633..591175 (-)	543	WP_000891117.1	hypothetical protein	-
R4703_RS03135	-	591231..591701 (-)	471	WP_023396411.1	DUF3013 family protein	-
R4703_RS03140	-	591992..592444 (-)	453	WP_023396412.1	type II toxin-antitoxin system HicB family antitoxin	-
R4703_RS03145	-	592481..592660 (-)	180	WP_219576245.1	type II toxin-antitoxin system HicA family toxin	-
R4703_RS03150	-	592797..592976 (-)	180	WP_001048906.1	hypothetical protein	-
R4703_RS03155	-	593141..593380 (-)	240	WP_000818078.1	hypothetical protein	-
R4703_RS03160	rarA	593650..594921 (+)	1272	WP_023396414.1	replication-associated recombination protein A	Machinery gene
R4703_RS03170	-	595466..596785 (-)	1320	WP_317817874.1	glycoside hydrolase family 32 protein	-
R4703_RS03175	-	596795..598411 (-)	1617	WP_050200918.1	ABC transporter substrate-binding protein	-
R4703_RS03180	-	598440..599330 (-)	891	WP_000797961.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46980.41 Da
• Isoelectric Point: 5.9140

>NTDB_id=818409 R4703_RS03160 WP_023396414.1 593650..594921(+) (rarA) [Streptococcus pneumoniae strain LYP]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
ITLSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDHLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=818409 R4703_RS03160 WP_023396414.1 593650..594921(+) (rarA) [Streptococcus pneumoniae strain LYP]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCGGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTGAAAATCCTTTCTTCTCTG
TCACTCCTGCCATTCGTAGCCGAGTTCAAATTTTCGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAACTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTGGCTGTTCTCTCTACCCCTGAGAATGACGAGGGCATTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATCCGTGGCTCAGATGTGGATGCCAGTCTCCACTATGCTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGCTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCCCAGAAGATTGGGTTTCCAGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTGCGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTCAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCATTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	57.946	96.69	0.56