Detailed information NTG0816701

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: R3J31_RS03805
• Genome accession: NZ_CP136968
• Coordinates: 867722..869011 (+)
• Length: 429 a.a.
• NCBI ID: WP_225621832.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain XYL1966/18
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 862722..874011

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3J31_RS03795 (R3J31_03785)	-	864406..866316 (+)	1911	WP_004083744.1	DUF3857 domain-containing transglutaminase family protein	-
R3J31_RS03800 (R3J31_03790)	lolA	866879..867505 (+)	627	WP_049756311.1	outer membrane lipoprotein chaperone LolA	-
R3J31_RS03805 (R3J31_03795)	rarA	867722..869011 (+)	1290	WP_225621832.1	replication-associated recombination protein A	Machinery gene
R3J31_RS03810 (R3J31_03800)	crcB	869172..869573 (+)	402	WP_004083741.1	fluoride efflux transporter CrcB	-
R3J31_RS03815 (R3J31_03805)	-	870249..871745 (+)	1497	WP_128283905.1	sensor histidine kinase	-
R3J31_RS03820 (R3J31_03810)	folK	871871..872386 (+)	516	WP_031345731.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
R3J31_RS03825 (R3J31_03815)	-	872397..873134 (-)	738	WP_004083738.1	pteridine reductase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47824.50 Da
• Isoelectric Point: 6.3540

>NTDB_id=816701 R3J31_RS03805 WP_225621832.1 867722..869011(+) (rarA) [Xylella fastidiosa subsp. multiplex strain XYL1966/18]
MRPRTLHEMVGQKRLLAPDRALHRAVASGNVHSMILWGPPGCGKTTLSLLLAHYIDAEFRAVSAVLSGLPEVRQILAEAA
QRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSALLSRCRVHVLEAVSSQDIVVALQRALQ
DTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDEQITADLLSQVLADRSRRFDKRGEQFYDQISAL
HKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALEAWDIYERLGSPEGDLAFAQLVLYLAS
TAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIEYQYDHDAENGVALEQTCFPDALGERIYYQPVSRG
LEIKLKEKLDWLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1290 bp

>NTDB_id=816701 R3J31_RS03805 WP_225621832.1 867722..869011(+) (rarA) [Xylella fastidiosa subsp. multiplex strain XYL1966/18]
ATGCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGC
TTCCGGGAATGTGCATTCCATGATTTTGTGGGGACCGCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCATT
ACATTGATGCAGAATTTCGGGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATCTTGGCTGAGGCTGCG
CAGCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTT
TCTGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAGAATCCATCCTTCGAATTGAACTCGGCGT
TACTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCGTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAG
GATACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGG
TGACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGAGCAGATAACCGCTGACT
TGCTTTCGCAAGTGCTTGCCGATCGTAGTCGGCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTG
CACAAGAGTGTACGTAGTTCCAACCCGGATGCGGCATTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGTGATCCTAT
CTACTTGGCCCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGG
AGGCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGATCTGGCGTTCGCGCAGTTGGTGCTGTACTTGGCAAGT
ACAGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACTCAGGATGTTCC
GCTACATCTGCGCAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGAGTATCAGTACGATCATGATGCTG
AGAACGGTGTTGCGCTGGAACAGACTTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAACCGGTATCCCGCGGT
CTGGAGATTAAGCTGAAGGAGAAGTTGGACTGGTTGCGTGCAGCACGTGCTCAGATTCAAGCGGATAAGCCGCAGCGGCC
GCGTGCATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (247-412)

• AAA C-terminal domain (AAA_assoc_2) (168-245)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (1-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.462	96.97	0.373