Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   RJD36_RS10855 Genome accession   NZ_CP136943
Coordinates   2149146..2151482 (-) Length   778 a.a.
NCBI ID   WP_048791122.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP082     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2144146..2156482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJD36_RS10830 (RJD36_10830) trxA 2144567..2144881 (-) 315 WP_003066440.1 thioredoxin -
  RJD36_RS10835 (RJD36_10835) - 2145121..2145618 (+) 498 WP_003066443.1 phosphatase PAP2 family protein -
  RJD36_RS10840 (RJD36_10840) nadC 2145698..2146558 (-) 861 WP_048791132.1 carboxylating nicotinate-nucleotide diphosphorylase -
  RJD36_RS10845 (RJD36_10845) - 2146586..2147890 (-) 1305 WP_317751273.1 L-aspartate oxidase -
  RJD36_RS10850 (RJD36_10850) nadA 2148127..2149047 (+) 921 WP_003066446.1 quinolinate synthase NadA -
  RJD36_RS10855 (RJD36_10855) mutS/mutS2 2149146..2151482 (-) 2337 WP_048791122.1 endonuclease MutS2 Machinery gene
  RJD36_RS10860 (RJD36_10860) - 2151588..2152136 (-) 549 WP_003066448.1 CvpA family protein -
  RJD36_RS10865 (RJD36_10865) zapA 2152139..2152447 (-) 309 WP_003066449.1 cell division protein ZapA -
  RJD36_RS10870 (RJD36_10870) rnhC 2152569..2153471 (+) 903 WP_117479482.1 ribonuclease HIII -
  RJD36_RS10875 (RJD36_10875) lepB 2153488..2154081 (+) 594 WP_003066451.1 signal peptidase I -
  RJD36_RS10880 (RJD36_10880) - 2154209..2156402 (+) 2194 Protein_2095 ATP-dependent RecD-like DNA helicase -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87723.06 Da        Isoelectric Point: 6.2053

>NTDB_id=816374 RJD36_RS10855 WP_048791122.1 2149146..2151482(-) (mutS/mutS2) [Streptococcus pasteurianus strain WUSP082]
MNNRILEQLEFDKVKQLFAGYLQTEQGQDELRKLEPMTEPDRISRSFDEMSDMEQIFIEHHSFGMGSLRDISESMRRLEL
DADVNISEIIDIKKVLQVSAEIKHFYNDLENVELSALNTLFEKIELLPSLQGSLQAINDGGFIENFASSELDRIRRQINH
DEGRVRQILQDILKKQADHLTETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER
HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENNAIVPQLSADKTVQLLQARHPLLTDPVANDLHFLDE
LTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD
KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG
RSNAFEIARRLGLAEIIVNEAERLTDSDTDVNHIIERLEEQNHESRKRLDHIKEVEQDNLKFNRAVKKLYNEFSHAKDKE
LEKARAKAQEIVDKAMTESEEILKNLHDRASLKPHEVIEAKSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIVVTAYG
QRGTLVNQGKNGKWEVQVGLIKMTLKEDEFTLVKVQEEAQKPKKKQVNVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF
IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGCTIANLG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=816374 RJD36_RS10855 WP_048791122.1 2149146..2151482(-) (mutS/mutS2) [Streptococcus pasteurianus strain WUSP082]
ATGAACAACAGAATTTTAGAACAGTTAGAATTTGATAAAGTCAAGCAACTTTTTGCTGGCTATTTACAGACTGAGCAAGG
CCAAGACGAGTTACGTAAACTTGAGCCAATGACTGAGCCTGACCGCATTTCACGTTCCTTTGATGAAATGTCGGACATGG
AGCAAATTTTCATTGAACACCATTCTTTTGGAATGGGGAGTTTGCGTGACATTTCTGAAAGTATGCGTCGCTTGGAATTG
GATGCTGACGTTAATATCTCAGAAATTATCGACATCAAGAAAGTCTTGCAAGTCTCAGCTGAAATCAAGCATTTTTATAA
TGATTTGGAAAATGTAGAGTTGTCTGCATTAAATACTCTTTTTGAGAAGATTGAATTGTTGCCAAGTCTGCAAGGTAGCT
TACAAGCGATTAATGACGGTGGTTTCATTGAAAATTTTGCAAGTTCAGAATTGGACCGTATTCGTCGCCAAATCAATCAT
GACGAAGGTAGAGTTCGTCAAATTTTGCAGGATATTTTGAAAAAACAAGCTGATCATTTGACAGAGACTTTGATTGCTAG
TCGTAATGGTCGTGCGGTTTTGCCTGTGAAAAATAGCTACCGCAACCGTATTTCAGGGGTTGTGCATGATATTTCGGCAT
CAGGAAGTACGGTTTATATTGAACCGCGCGCAGTAGTGCAACTTAATGAAGAAATCACGCAATTGCGAGCAGATGAACGT
CACGAAATGGCACGTATTTTACGTGAATTGTCAAATATGCTTCGCCCACATACTAATATTATTCGTAACAATGCGTGGGT
TTTAGGGCATTTGGATTTTGTTCGTGCTAAGTTCCTCTTCATGCAGGAAAACAACGCAATCGTGCCACAATTATCAGCAG
ATAAAACCGTGCAACTATTACAAGCTCGCCACCCGCTTTTGACCGATCCAGTCGCCAATGACCTTCATTTTCTTGACGAA
TTGACCGTTATTGTTATTACAGGCCCAAATACTGGTGGTAAGACAGTCATGTTGAAAACATTAGGCTTAGCGCAGCTTAT
GGCGCAATCAGGCTTGCCAATCTTGGCTGACAAGGGGAGTAAAGTCGCCGTATTTAATGAGATTTTTGCAGATATTGGTG
ATGAGCAATCTATCGAACAAAGTTTGTCAACATTCTCAAGCCATATGACAAATATTGTTGAGATTTTGGCAGCAGCAGAT
AAAGATAGTCTTGTCTTGGTCGATGAATTGGGAGCAGGAACTGACCCACAAGAAGGTGCCAGTCTTGCGATTGCCATTCT
TGAACACCTTCGTCTCATGGAAATTAAAACCATGGCAACGACACATTATCCAGAATTGAAAGCTTACGGTATTGAGACAG
AATTTGTGGAAAATGCCAGTATGGAATTTGATACAGAGACATTAAGTCCAACTTATCATTTTATGCAAGGTGTACCAGGG
CGCTCAAATGCCTTTGAAATTGCTCGTCGTCTTGGTTTAGCAGAGATTATTGTCAATGAAGCAGAGCGTTTGACAGACTC
TGATACGGATGTTAACCATATCATCGAGCGTTTGGAAGAACAAAACCATGAAAGTCGTAAACGACTTGACCATATCAAAG
AAGTGGAACAAGATAACCTCAAATTCAATCGTGCGGTCAAGAAACTTTATAACGAATTTTCACATGCCAAGGACAAAGAA
CTTGAAAAAGCTCGCGCCAAAGCGCAAGAAATTGTGGATAAAGCCATGACAGAGAGTGAAGAAATTCTCAAAAATCTTCA
TGATAGAGCAAGCCTTAAACCGCATGAAGTTATTGAAGCCAAAAGTCAGCTGAAAAAATTGGCGCCTGAAGTTGATTTGT
CGAAAAATAAAGTCCTCAAGAAAGCTAAAAAATTGCGCGCACCGCGCGTGGGTGATGACATTGTCGTCACAGCTTACGGA
CAACGCGGAACATTGGTTAACCAAGGGAAAAACGGGAAATGGGAAGTGCAAGTTGGTCTTATTAAAATGACACTTAAAGA
GGACGAATTTACCCTTGTTAAAGTTCAAGAGGAAGCCCAAAAACCGAAGAAAAAACAAGTCAATGTGGTCAAGAAAAGCA
AAAAATCAGCTGGTCCACGTGCCCGCCTTGATCTTCGTGGTAAACGCTATGAAGAAGCCATGCAAGAATTGGATGAATTT
ATCGACCAAGCCTTGCTAAATAACATGGCACAAGTCGATATTATTCACGGTATCGGAACAGGTGTTATCCGTGAAGGTGT
CACAAAATACCTTCGCCGCAACAAACACGTCAAATCATTTGGTTATGCCCCACAAAATGCAGGTGGCAGCGGCTGCACCA
TTGCAAATCTAGGGTGA

Domains

Predicted by InterProScan.

Smr domain (Smr)

(703-776)

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

41.139

100

0.418