Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   R8522_RS06620 Genome accession   NZ_AP026916
Coordinates   1316745..1318493 (-) Length   582 a.a.
NCBI ID   WP_000828853.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700006     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1311745..1323493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8522_RS06575 (PC0006_13410) - 1311825..1312412 (-) 588 WP_000821279.1 CPBP family intramembrane glutamic endopeptidase -
  R8522_RS06580 - 1312415..1312648 (-) 234 Protein_1307 transcriptional regulator -
  R8522_RS06585 (PC0006_13430) - 1312661..1313041 (-) 381 WP_000566531.1 arsenate reductase family protein -
  R8522_RS06590 (PC0006_13440) - 1313034..1313357 (-) 324 WP_000143349.1 hypothetical protein -
  R8522_RS06595 (PC0006_13450) - 1313368..1313619 (-) 252 Protein_1310 replication initiator protein A -
  R8522_RS06600 (PC0006_13460) - 1313616..1313789 (-) 174 WP_001168349.1 hypothetical protein -
  R8522_RS06605 (PC0006_13470) rplL 1313990..1314358 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  R8522_RS06610 (PC0006_13480) rplJ 1314434..1314934 (-) 501 WP_001287279.1 50S ribosomal protein L10 -
  R8522_RS06615 (PC0006_13490) - 1315184..1316443 (-) 1260 WP_001823042.1 TRZ/ATZ family protein -
  R8522_RS06620 (PC0006_13500) rcrQ 1316745..1318493 (-) 1749 WP_000828853.1 ABC transporter ATP-binding protein Regulator
  R8522_RS06625 (PC0006_13510) - 1318495..1320219 (-) 1725 WP_000876329.1 ABC transporter ATP-binding protein -
  R8522_RS06630 (PC0006_13520) msrB 1320277..1321215 (-) 939 WP_000818207.1 peptide-methionine (R)-S-oxide reductase MsrB -
  R8522_RS06635 (PC0006_13530) - 1321282..1321434 (-) 153 WP_001852357.1 hypothetical protein -
  R8522_RS06640 (PC0006_13540) thrB 1321510..1322379 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64935.44 Da        Isoelectric Point: 7.3120

>NTDB_id=81608 R8522_RS06620 WP_000828853.1 1316745..1318493(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700006]
MKRQTVNQTLKRLVVDLANHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGNGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKIAIVGPTGAGKSTLINLLMRFYPISSGDIL
LDGQSIYDYTRASLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQFPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
QELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=81608 R8522_RS06620 WP_000828853.1 1316745..1318493(-) (rcrQ) [Streptococcus pneumoniae strain PZ900700006]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGTCGTAGATTTAGCAAACCATCCCTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGAGAGCGAATCATCCATAAACTCCATCG
TTTACCGATTGCCTTTGTAGATAGGCAAGGCAATGGAGAGATGGTCAGTCGTGTAACCACGGATATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAGATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAACCTTGACTGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAATGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACATGT
CTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGATAGCCATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATCTTG
CTGGATGGGCAATCCATTTATGATTATACACGAGCATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTGGCT
CACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCAAAG
CAGCTAATGCAGACTTTTTCATCCAACAGTTTCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTCTCT
GTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAACTTC
TTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGCTTCATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAACCAT
CAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(24-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.544

96.564

0.363