Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   QAY60_RS08210 Genome accession   NZ_CP122488
Coordinates   1708291..1708977 (-) Length   228 a.a.
NCBI ID   WP_075583650.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT-MRSA44     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1703291..1713977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY60_RS08185 (QAY60_08155) - 1703330..1705012 (-) 1683 Protein_1609 DNA internalization-related competence protein ComEC/Rec2 -
  QAY60_RS08190 (QAY60_08160) istA 1705135..1706370 (+) 1236 WP_001215400.1 IS21 family transposase -
  QAY60_RS08195 (QAY60_08165) istB 1706382..1707149 (+) 768 WP_001095317.1 IS21-like element helper ATPase IstB -
  QAY60_RS08200 (QAY60_08170) - 1707212..1707733 (-) 522 Protein_1612 DNA internalization-related competence protein ComEC/Rec2 -
  QAY60_RS08205 (QAY60_08175) - 1707738..1708199 (-) 462 WP_000439693.1 ComE operon protein 2 -
  QAY60_RS08210 (QAY60_08180) comEA 1708291..1708977 (-) 687 WP_075583650.1 ComEA family DNA-binding protein Machinery gene
  QAY60_RS08215 (QAY60_08185) - 1709017..1709733 (-) 717 WP_000084831.1 class I SAM-dependent DNA methyltransferase -
  QAY60_RS08220 (QAY60_08190) rsfS 1709736..1710089 (-) 354 WP_001088022.1 ribosome silencing factor -
  QAY60_RS08225 (QAY60_08195) yqeK 1710090..1710674 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  QAY60_RS08230 (QAY60_08200) nadD 1710664..1711233 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  QAY60_RS08235 (QAY60_08205) yhbY 1711236..1711526 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  QAY60_RS08240 (QAY60_08210) aroE 1711530..1712336 (-) 807 WP_000666749.1 shikimate dehydrogenase -
  QAY60_RS08245 (QAY60_08215) yqeH 1712350..1713450 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25787.53 Da        Isoelectric Point: 9.6753

>NTDB_id=815977 QAY60_RS08210 WP_075583650.1 1708291..1708977(-) (comEA) [Staphylococcus aureus strain IT-MRSA44]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=815977 QAY60_RS08210 WP_075583650.1 1708291..1708977(-) (comEA) [Staphylococcus aureus strain IT-MRSA44]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.123

100

0.991
  comEA Staphylococcus aureus N315

98.246

100

0.982