Detailed information NTG0814567

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RX583_RS14955
• Genome accession: NZ_CP136402
• Coordinates: 2813737..2815002 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis subsp. subtilis str. 168
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2808737..2820002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RX583_RS14935 (RX583_14935)	yrrB	2810108..2810728 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
RX583_RS14940 (RX583_14940)	mnmA	2810814..2811929 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
RX583_RS14945 (RX583_14945)	iscSA	2811960..2813099 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
RX583_RS14950 (RX583_14950)	cymR	2813118..2813534 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
RX583_RS14955 (RX583_14955)	rarA	2813737..2815002 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
RX583_RS14960 (RX583_14960)	tcdA	2815044..2815808 (-)	765	WP_009967893.1	ThiF family adenylyltransferase	-
RX583_RS14970 (RX583_14970)	aspS	2816144..2817922 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
RX583_RS14975 (RX583_14975)	hisS	2817936..2819210 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
RX583_RS14980 (RX583_14980)	yrzK	2819592..2819762 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=814567 RX583_RS14955 WP_004398500.1 2813737..2815002(+) (rarA) [Bacillus subtilis subsp. subtilis str. 168]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=814567 RX583_RS14955 WP_004398500.1 2813737..2815002(+) (rarA) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1