Detailed information NTG0813493

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MTS71_RS17950
• Genome accession: NZ_CP121612
• Coordinates: 3718878..3719579 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain JAB117
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3713878..3724579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS71_RS17915 (MTS71_17915)	kdsB	3714401..3715162 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MTS71_RS17920 (MTS71_17920)	-	3715174..3716154 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
MTS71_RS17925 (MTS71_17925)	-	3716166..3716507 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
MTS71_RS17930 (MTS71_17930)	-	3716525..3717298 (+)	774	WP_000497298.1	TatD family hydrolase	-
MTS71_RS17935 (MTS71_17935)	-	3717336..3717944 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MTS71_RS17940 (MTS71_17940)	-	3717954..3718508 (+)	555	WP_000841373.1	type II secretion system protein	-
MTS71_RS17945 (MTS71_17945)	xcpV	3718498..3718878 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
MTS71_RS17950 (MTS71_17950)	xcpW	3718878..3719579 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MTS71_RS17955 (MTS71_17955)	gspK	3719579..3720538 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
MTS71_RS17960 (MTS71_17960)	-	3720769..3721365 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
MTS71_RS17965 (MTS71_17965)	ung	3721416..3722129 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
MTS71_RS17970 (MTS71_17970)	-	3722126..3723250 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MTS71_RS17975 (MTS71_17975)	tadA	3723257..3723760 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
MTS71_RS17980 (MTS71_17980)	-	3723830..3724273 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=813493 MTS71_RS17950 WP_000594589.1 3718878..3719579(+) (xcpW) [Acinetobacter baumannii strain JAB117]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=813493 MTS71_RS17950 WP_000594589.1 3718878..3719579(+) (xcpW) [Acinetobacter baumannii strain JAB117]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996