Detailed information NTG0813410

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MTS34_RS05730
• Genome accession: NZ_CP121609
• Coordinates: 1175813..1176514 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain JAB186
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1170813..1181514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS34_RS05695 (MTS34_05695)	kdsB	1171336..1172097 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MTS34_RS05700 (MTS34_05700)	-	1172109..1173089 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
MTS34_RS05705 (MTS34_05705)	-	1173101..1173442 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
MTS34_RS05710 (MTS34_05710)	-	1173460..1174233 (+)	774	WP_000497298.1	TatD family hydrolase	-
MTS34_RS05715 (MTS34_05715)	-	1174271..1174879 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MTS34_RS05720 (MTS34_05720)	-	1174889..1175443 (+)	555	WP_000841373.1	type II secretion system protein	-
MTS34_RS05725 (MTS34_05725)	xcpV	1175433..1175813 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
MTS34_RS05730 (MTS34_05730)	xcpW	1175813..1176514 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MTS34_RS05735 (MTS34_05735)	gspK	1176514..1177473 (+)	960	WP_283026520.1	type II secretion system minor pseudopilin GspK	-
MTS34_RS05740 (MTS34_05740)	-	1177704..1178300 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
MTS34_RS05745 (MTS34_05745)	ung	1178351..1179064 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
MTS34_RS05750 (MTS34_05750)	-	1179061..1180185 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MTS34_RS05755 (MTS34_05755)	tadA	1180192..1180695 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
MTS34_RS05760 (MTS34_05760)	-	1180765..1181208 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=813410 MTS34_RS05730 WP_000594589.1 1175813..1176514(+) (xcpW) [Acinetobacter baumannii strain JAB186]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=813410 MTS34_RS05730 WP_000594589.1 1175813..1176514(+) (xcpW) [Acinetobacter baumannii strain JAB186]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996