Detailed information NTG0813142

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MTS70_RS07945
• Genome accession: NZ_CP121579
• Coordinates: 1620465..1621166 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain RAB53
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1615465..1626166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS70_RS07910 (MTS70_07910)	kdsB	1615988..1616749 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MTS70_RS07915 (MTS70_07915)	-	1616761..1617741 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
MTS70_RS07920 (MTS70_07920)	-	1617753..1618094 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
MTS70_RS07925 (MTS70_07925)	-	1618112..1618885 (+)	774	WP_000497298.1	TatD family hydrolase	-
MTS70_RS07930 (MTS70_07930)	-	1618923..1619531 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MTS70_RS07935 (MTS70_07935)	-	1619541..1620095 (+)	555	WP_000841373.1	type II secretion system protein	-
MTS70_RS07940 (MTS70_07940)	xcpV	1620085..1620465 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
MTS70_RS07945 (MTS70_07945)	xcpW	1620465..1621166 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MTS70_RS07950 (MTS70_07950)	gspK	1621166..1622125 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
MTS70_RS07955 (MTS70_07955)	-	1622356..1622952 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
MTS70_RS07960 (MTS70_07960)	ung	1623003..1623716 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
MTS70_RS07965 (MTS70_07965)	-	1623713..1624837 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MTS70_RS07970 (MTS70_07970)	tadA	1624844..1625347 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
MTS70_RS07975 (MTS70_07975)	-	1625417..1625860 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=813142 MTS70_RS07945 WP_000594589.1 1620465..1621166(+) (xcpW) [Acinetobacter baumannii strain RAB53]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=813142 MTS70_RS07945 WP_000594589.1 1620465..1621166(+) (xcpW) [Acinetobacter baumannii strain RAB53]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996