Detailed information NTG0813023

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MTS31_RS11380
• Genome accession: NZ_CP121563
• Coordinates: 2349323..2350024 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain RAB94
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2344323..2355024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS31_RS11345 (MTS31_11345)	kdsB	2344846..2345607 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MTS31_RS11350 (MTS31_11350)	-	2345619..2346599 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
MTS31_RS11355 (MTS31_11355)	-	2346611..2346952 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
MTS31_RS11360 (MTS31_11360)	-	2346970..2347743 (+)	774	WP_000497298.1	TatD family hydrolase	-
MTS31_RS11365 (MTS31_11365)	-	2347781..2348389 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MTS31_RS11370 (MTS31_11370)	-	2348399..2348953 (+)	555	WP_000841373.1	type II secretion system protein	-
MTS31_RS11375 (MTS31_11375)	xcpV	2348943..2349323 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
MTS31_RS11380 (MTS31_11380)	xcpW	2349323..2350024 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MTS31_RS11385 (MTS31_11385)	gspK	2350024..2350983 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
MTS31_RS11390 (MTS31_11390)	-	2351214..2351810 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
MTS31_RS11395 (MTS31_11395)	ung	2351861..2352574 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
MTS31_RS11400 (MTS31_11400)	-	2352571..2353695 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MTS31_RS11405 (MTS31_11405)	tadA	2353702..2354205 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
MTS31_RS11410 (MTS31_11410)	-	2354275..2354718 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=813023 MTS31_RS11380 WP_000594589.1 2349323..2350024(+) (xcpW) [Acinetobacter baumannii strain RAB94]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=813023 MTS31_RS11380 WP_000594589.1 2349323..2350024(+) (xcpW) [Acinetobacter baumannii strain RAB94]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996