Detailed information NTG0812935

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: MTS96_RS15250
• Genome accession: NZ_CP121557
• Coordinates: 3187448..3188149 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain RAB9
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3182448..3193149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS96_RS15215 (MTS96_15215)	kdsB	3182971..3183732 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MTS96_RS15220 (MTS96_15220)	-	3183744..3184724 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
MTS96_RS15225 (MTS96_15225)	-	3184736..3185077 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
MTS96_RS15230 (MTS96_15230)	-	3185095..3185868 (+)	774	WP_000497298.1	TatD family hydrolase	-
MTS96_RS15235 (MTS96_15235)	-	3185906..3186514 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
MTS96_RS15240 (MTS96_15240)	-	3186524..3187078 (+)	555	WP_000841373.1	type II secretion system protein	-
MTS96_RS15245 (MTS96_15245)	xcpV	3187068..3187448 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
MTS96_RS15250 (MTS96_15250)	xcpW	3187448..3188149 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
MTS96_RS15255 (MTS96_15255)	gspK	3188149..3189108 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
MTS96_RS15260 (MTS96_15260)	-	3189339..3189935 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
MTS96_RS15265 (MTS96_15265)	ung	3189986..3190699 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
MTS96_RS15270 (MTS96_15270)	-	3190696..3191820 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
MTS96_RS15275 (MTS96_15275)	tadA	3191827..3192330 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
MTS96_RS15280 (MTS96_15280)	-	3192400..3192843 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=812935 MTS96_RS15250 WP_000594589.1 3187448..3188149(+) (xcpW) [Acinetobacter baumannii strain RAB9]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=812935 MTS96_RS15250 WP_000594589.1 3187448..3188149(+) (xcpW) [Acinetobacter baumannii strain RAB9]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996