Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   P8P68_RS08495 Genome accession   NZ_CP121467
Coordinates   1736422..1738182 (+) Length   586 a.a.
NCBI ID   WP_278275869.1    Uniprot ID   A0AAX3TJ31
Organism   Streptococcus sp. D7B5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1731422..1743182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8P68_RS08475 (P8P68_08475) - 1732554..1733270 (+) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  P8P68_RS08480 (P8P68_08480) - 1733321..1734025 (-) 705 WP_198464349.1 CD20-like domain-containing protein -
  P8P68_RS08485 (P8P68_08485) - 1734218..1734679 (+) 462 WP_278275868.1 MarR family winged helix-turn-helix transcriptional regulator -
  P8P68_RS08490 (P8P68_08490) rcrP 1734663..1736432 (+) 1770 WP_000731794.1 ABC transporter ATP-binding protein Regulator
  P8P68_RS08495 (P8P68_08495) rcrQ 1736422..1738182 (+) 1761 WP_278275869.1 ABC transporter ATP-binding protein Regulator
  P8P68_RS08500 (P8P68_08500) - 1738279..1738782 (+) 504 WP_049489483.1 phosphatase PAP2 family protein -
  P8P68_RS08505 (P8P68_08505) - 1738896..1739342 (+) 447 WP_049489485.1 LytTR family DNA-binding domain-containing protein -
  P8P68_RS08510 (P8P68_08510) - 1739348..1740022 (+) 675 WP_049489486.1 membrane protein -
  P8P68_RS08515 (P8P68_08515) rpmB 1740129..1740317 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  P8P68_RS08520 (P8P68_08520) - 1740470..1740835 (+) 366 WP_000216437.1 Asp23/Gls24 family envelope stress response protein -
  P8P68_RS08525 (P8P68_08525) - 1740838..1742505 (+) 1668 WP_049478837.1 DAK2 domain-containing protein -
  P8P68_RS08530 (P8P68_08530) - 1742630..1742836 (+) 207 WP_000390701.1 hypothetical protein -
  P8P68_RS08535 (P8P68_08535) - 1742833..1743027 (+) 195 WP_000709170.1 hypothetical protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64574.34 Da        Isoelectric Point: 5.3302

>NTDB_id=812259 P8P68_RS08495 WP_278275869.1 1736422..1738182(+) (rcrQ) [Streptococcus sp. D7B5]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIAGFLVVLYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESRKERQLSNMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYELDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTDISDERMIEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMGKAGFYADLYNSQFTEDQAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=812259 P8P68_RS08495 WP_278275869.1 1736422..1738182(+) (rcrQ) [Streptococcus sp. D7B5]
ATGGAAAATAAAAAAGTTTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTTCCTCTCCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGCATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACTAACTTGATTTCAGATG
GCTTGGCTACAGAAATCGACTTGGTAGCTGTGTCAAACATTGCTGGATTTTTGGTTGTCCTATATGTGTTTGGAGCTATC
CTTAATTATACACAGGCCTATATATTTTCAACGAGTATCCAACATTTTTCAAAACGCTTGCGGACGGCTATCGCTGAAAA
AATCAATCGTTTGCCACTTGGCTATTTTGACCGTCATTCACAAGGAGACACCCTTTCGCGCGTGACCAATGATGTGGATA
CAGCAGCGCAATCTCTCAACCAAAGTCTAGGGACAGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTAGCTCTCGTAACAGTGGTCTCTACGCTTGTTGGTTTTGCGGCGGTTTCCGTAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCCCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ATAATGTAGTGACCAGCTACAACGCAGTGGACACCTCCAAAGCGAGATTTGCAGGGTTAAACCAAGACTTGCATGACAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAACTTTAGTTATGTCTTAGTCAT
CATCGTTGGTGCCGCGCTGGCGTTAGAAGGGCATATCACGATAGGGATTATCGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCCTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTCTAGCTGAAGCAGAGATGCAAGATGAATCTCGTAAGGAAAGACAATTGAGCAACATGAAAGGGGAAGTAGTCTTTGA
TCATGTGTCCTTTGGATATACACCAGAGCGCACCATTATCCATGACTTTTCTGCGACAGCTCATGCAGGTCAGAAGGTTG
CTATTGTTGGACCGACTGGGGCTGGGAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGCTAGATAAGGGAAGT
ATCCGTATCGATGGTGTCGATACCAAGGACATGAAGCGTTCGGAAGTACACGATGCCTTTTCAATGGTCTTGCAGGATAC
TTGGCTCTTTGAAGGAACCATTCGAGAGAACCTGATCTATAATCAGACAGACATCAGTGATGAACGAATGATAGAAGCTA
GCAAGGCAGTGGGAATCCACCACTTTATCATGACTTTGCCAGATGGCTACGATACTGTTTTGGATGACACCGTGACCTTG
TCTGTTGGACAGAAACAGCTCTTGACCATTGCTCGTGCCCTTCTCAAAGATGCACCGCTCTTGATTTTGGATGAAGCGAC
ATCTTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCTATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCA
TCGCCCACCGCTTGTCAACTATTCGTAATGCCGATTTGATTCTTGTCATGAAAGATGGCAATATCATCGAGCAAGGCAAC
CATGAGGAATTGATGGGCAAAGCTGGCTTCTATGCGGATCTTTACAACAGCCAATTCACAGAAGACCAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.781

99.659

0.666