Detailed information NTG0812039

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: P9J63_RS07770
• Genome accession: NZ_CP121375
• Coordinates: 1587561..1588262 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594581.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain LRT
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1582561..1593262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P9J63_RS07735 (P9J63_07735)	kdsB	1583084..1583845 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
P9J63_RS07740 (P9J63_07740)	-	1583857..1584837 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
P9J63_RS07745 (P9J63_07745)	-	1584849..1585190 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
P9J63_RS07750 (P9J63_07750)	-	1585208..1585981 (+)	774	WP_000497302.1	TatD family hydrolase	-
P9J63_RS07755 (P9J63_07755)	-	1586019..1586627 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
P9J63_RS07760 (P9J63_07760)	-	1586637..1587191 (+)	555	WP_032036393.1	type II secretion system protein	-
P9J63_RS07765 (P9J63_07765)	xcpV	1587181..1587561 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
P9J63_RS07770 (P9J63_07770)	xcpW	1587561..1588262 (+)	702	WP_000594581.1	type II secretion system minor pseudopilin GspJ	Machinery gene
P9J63_RS07775 (P9J63_07775)	gspK	1588262..1589221 (+)	960	WP_032036395.1	type II secretion system minor pseudopilin GspK	-
P9J63_RS07780 (P9J63_07780)	-	1589451..1590047 (+)	597	WP_032036397.1	6-carboxytetrahydropterin synthase	-
P9J63_RS07785 (P9J63_07785)	ung	1590098..1590811 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
P9J63_RS07790 (P9J63_07790)	-	1590808..1591932 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
P9J63_RS07795 (P9J63_07795)	tadA	1591939..1592442 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
P9J63_RS07800 (P9J63_07800)	-	1592512..1592955 (+)	444	WP_002057383.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26731.68 Da
• Isoelectric Point: 9.3468

>NTDB_id=812039 P9J63_RS07770 WP_000594581.1 1587561..1588262(+) (xcpW) [Acinetobacter baumannii strain LRT]
MIKNKYIHIRSFSSRLAERSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=812039 P9J63_RS07770 WP_000594581.1 1587561..1588262(+) (xcpW) [Acinetobacter baumannii strain LRT]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGAACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAAATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983