Detailed information NTG0811460

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: P8632_RS06660
• Genome accession: NZ_CP121263
• Coordinates: 1281987..1284410 (+)
• Length: 807 a.a.
• NCBI ID: WP_064207354.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain FSEL1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1276987..1289410

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P8632_RS06630 (P8632_06620)	cymR	1276995..1277417 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
P8632_RS06635 (P8632_06625)	-	1277527..1277670 (+)	144	WP_017176172.1	SAS049 family protein	-
P8632_RS06640 (P8632_06630)	-	1277769..1278773 (-)	1005	WP_049336022.1	LLM class flavin-dependent oxidoreductase	-
P8632_RS06645 (P8632_06635)	-	1278973..1280112 (+)	1140	WP_064207357.1	cysteine desulfurase family protein	-
P8632_RS06650 (P8632_06640)	mnmA	1280116..1281227 (+)	1112	Protein_1270	tRNA 2-thiouridine(34) synthase MnmA	-
P8632_RS06655 (P8632_06645)	-	1281314..1281985 (+)	672	WP_064207355.1	tetratricopeptide repeat protein	-
P8632_RS06660 (P8632_06650)	recD2	1281987..1284410 (+)	2424	WP_064207354.1	ATP-dependent RecD-like DNA helicase	Machinery gene
P8632_RS06665 (P8632_06655)	alaS	1284690..1287320 (+)	2631	WP_242228833.1	alanine--tRNA ligase	-
P8632_RS06670 (P8632_06660)	-	1287385..1287645 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
P8632_RS06675 (P8632_06665)	ruvX	1287646..1288073 (+)	428	Protein_1275	Holliday junction resolvase RuvX	-
P8632_RS06680 (P8632_06670)	-	1288088..1288396 (+)	309	WP_064207352.1	DUF1292 domain-containing protein	-
P8632_RS06685 (P8632_06675)	-	1288656..1289291 (+)	636	WP_002448992.1	O-methyltransferase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91697.29 Da
• Isoelectric Point: 4.8907

>NTDB_id=811460 P8632_RS06660 WP_064207354.1 1281987..1284410(+) (recD2) [Staphylococcus hominis strain FSEL1]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRIKTYKNHFKII
EQSDLQIHIGELEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVDLTEVYRQQDGSSIIDLAHRMKHHEPIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIKFGDITFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIIDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSQVNIDVEENDEQINIDDKDDNNAVKHITLSEETIYQINPMINMGNVS
PYDFAEH

Nucleotide

• Length: 2424 bp

>NTDB_id=811460 P8632_RS06660 WP_064207354.1 1281987..1284410(+) (recD2) [Staphylococcus hominis strain FSEL1]
ATGTCAAACCCTACGCTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTGTTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAGTCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCTATGGCGATTTATCAATTCTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAAAACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAACTAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTGACTGGAGGTCCAGGAACAGGTAAGACAACTGTTATTAAAGGGA
TTGTAGAATTATATGCTGAAATTCATGGTCTATCTCTTAAGTATTCTGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGAGCATCAAAGCGTTTACAAGAATCAACTGGCTTAGAGGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAGAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCACCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATCATTCTAGTAGGGGATGAAGAT
CAATTGCCATCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTGATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGCATTATTGACTTAGCGCATCGCATGAAACATCATGAGCCAATAGATATTACAA
AACGTTATCATGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACTGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAAAGTTTGGCGATATAACGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTCAATCGACCAAATGATAACATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTC
TGGGCTAAAGAAAATGCACTTAACAAAGATGTACTGATTATCGATTTTGAAGGGAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGGTCAGAATTTCCTATTGTCATTATGCCTA
TTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGCGATCCAAAGGCATTTGACATTGCCTTAAATACGCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCAGGTTAATATAGATGTAGAAGAGAATGATGAACAGATAAATATAGATGATAAAGATGATA
ATAATGCAGTTAAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCG
CCTTACGACTTTGCTGAACATTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (340-545)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.626	99.38	0.493