Detailed information NTG0810599

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: P8R98_RS00085
• Genome accession: NZ_CP121159
• Coordinates: 16098..17462 (-)
• Length: 454 a.a.
• NCBI ID: WP_001085195.1
• Uniprot ID: A0AAV3JMW2
• Organism: Streptococcus agalactiae strain S1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 11098..22462

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P8R98_RS00065	-	11321..12289 (+)	969	WP_000668258.1	substrate-binding domain-containing protein	-
P8R98_RS00070	gltX	12329..13783 (-)	1455	WP_001284498.1	glutamate--tRNA ligase	-
P8R98_RS00075	-	13992..15311 (-)	1320	WP_000759708.1	FAD-containing oxidoreductase	-
P8R98_RS00080	-	15465..15962 (-)	498	WP_000214742.1	carbonic anhydrase	-
P8R98_RS00085	radA	16098..17462 (-)	1365	WP_001085195.1	DNA repair protein RadA	Machinery gene
P8R98_RS00090	-	17624..18070 (-)	447	WP_000049186.1	dUTP diphosphatase	-
P8R98_RS00100	-	18265..19191 (-)	927	WP_000723859.1	alpha/beta hydrolase	-
P8R98_RS00105	-	19300..20904 (-)	1605	WP_000170435.1	CTP synthase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 49562.84 Da
• Isoelectric Point: 6.5148

>NTDB_id=810599 P8R98_RS00085 WP_001085195.1 16098..17462(-) (radA) [Streptococcus agalactiae strain S1]
MAKKKSVFTCQECGYQSPKYLGRCPNCSAWSSFVEEVEVQEVKNARVSLNGEKSRPTKLKDVSSINYSRTKTDMDEFNRV
LGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLANKGTVLYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQSIRSEIE
KIKPDFLIIDSIQTIMSPEVSSVQGSVSQVREVTAELMQLAKTNNIATFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGTRPILAEVQALVTPTVFGNAK
RTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTNPQESFIGEIGLTGEIR
RVTRIEQRINEASKLGFTKIYAPKNSLAGIEIPKGIDVIGVTTVSQVLKAVFST

Nucleotide

• Length: 1365 bp

>NTDB_id=810599 P8R98_RS00085 WP_001085195.1 16098..17462(-) (radA) [Streptococcus agalactiae strain S1]
GTGGCTAAGAAAAAATCAGTCTTCACCTGTCAAGAGTGTGGTTACCAATCACCTAAGTATTTGGGACGTTGTCCAAATTG
CTCAGCCTGGTCTTCATTTGTAGAAGAGGTTGAAGTTCAAGAAGTTAAAAATGCACGAGTTAGTTTGAACGGTGAAAAGT
CCCGACCGACGAAGTTAAAAGATGTTTCCTCAATTAACTATTCTAGAACTAAGACTGATATGGATGAATTTAACCGTGTT
CTAGGAGGCGGTGTTGTACCAGGAAGTTTGGTTCTGATTGGAGGAGACCCTGGGATAGGTAAATCTACTTTATTACTACA
AGTATCAACTCAGCTAGCTAATAAAGGTACAGTATTATATGTCTCAGGTGAGGAATCTGCAGAACAGATTAAGTTACGAA
GTGAGCGTCTAGGCGATATCGATAATGAATTTTACCTTTATGCCGAGACTAATATGCAAAGTATTCGGTCGGAGATTGAG
AAGATTAAACCAGATTTTCTTATTATTGATTCTATACAAACTATTATGAGTCCCGAAGTATCAAGTGTCCAAGGCTCTGT
TAGCCAAGTTCGCGAAGTGACCGCTGAATTGATGCAGTTAGCTAAAACTAATAATATTGCTACTTTTATTGTAGGTCATG
TGACTAAGGAGGGAACATTAGCAGGCCCTCGAATGCTAGAACATATGGTGGATACGGTTCTTTATTTTGAAGGGGAGCGT
CATCACACGTTCCGTATTTTACGGGCAGTCAAAAACCGTTTTGGTTCGACCAATGAAATAGGTATCTTTGAAATGCAGTC
GGGTGGTCTAGTTGAAGTTTTGAATCCAAGTCAAGTTTTTCTTGAAGAACGTTTAGACGGTGCAACAGGATCTGCTATTG
TTGTTACTATGGAAGGAACAAGGCCTATTTTAGCAGAGGTTCAAGCTTTAGTGACTCCGACTGTTTTTGGAAATGCTAAG
CGTACAACAACAGGTCTTGACTTTAATCGTGTCAGTCTTATTATGGCAGTTCTAGAAAAACGTTGTGGTTTATTGCTTCA
AAATCAAGATGCCTATTTAAAATCAGCGGGTGGTGTTAAATTGGATGAACCAGCAATTGATTTAGCTGTTGCTGTAGCTA
TTGCTTCCAGTTACAAAGAAAAACCCACAAATCCACAAGAATCATTTATTGGAGAAATTGGACTCACTGGTGAGATTCGT
CGCGTGACACGTATTGAGCAACGTATTAATGAGGCTAGTAAATTGGGCTTTACTAAAATTTATGCACCAAAGAATTCTCT
AGCTGGGATTGAAATACCTAAAGGCATTGATGTTATTGGTGTGACAACTGTTAGTCAGGTCTTAAAAGCAGTGTTTTCAA
CATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (360-425)

• AAA domain (AAA_25) (68-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae Rx1	88.079	99.78	0.879
radA	Streptococcus pneumoniae D39	88.079	99.78	0.879
radA	Streptococcus pneumoniae R6	88.079	99.78	0.879
radA	Streptococcus pneumoniae TIGR4	88.079	99.78	0.879
radA	Streptococcus mitis NCTC 12261	88.079	99.78	0.879
radA	Streptococcus mitis SK321	87.859	99.78	0.877
radA	Bacillus subtilis subsp. subtilis str. 168	62.914	99.78	0.628