Detailed information NTG0810174

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RO838_RS03785
• Genome accession: NZ_CP135134
• Coordinates: 868031..869398 (+)
• Length: 455 a.a.
• NCBI ID: WP_057682527.1
• Uniprot ID: -
• Organism: Xylella fastidiosa strain CFBP8478
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 863031..874398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RO838_RS03775 (RO838_03775)	-	864773..866683 (+)	1911	WP_020850921.1	DUF3857 domain-containing transglutaminase family protein	-
RO838_RS03780 (RO838_03780)	lolA	867245..867871 (+)	627	WP_004089126.1	outer membrane lipoprotein chaperone LolA	-
RO838_RS03785 (RO838_03785)	rarA	868031..869398 (+)	1368	WP_057682527.1	replication-associated recombination protein A	Machinery gene
RO838_RS03790 (RO838_03790)	crcB	869559..869960 (+)	402	WP_057682526.1	fluoride efflux transporter CrcB	-
RO838_RS03795 (RO838_03795)	-	870634..872130 (+)	1497	WP_057682524.1	ATP-binding protein	-
RO838_RS03800 (RO838_03800)	folK	872255..872770 (+)	516	WP_038229884.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
RO838_RS03805 (RO838_03805)	-	872781..873518 (-)	738	WP_057682523.1	pteridine reductase	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50632.85 Da
• Isoelectric Point: 6.7783

>NTDB_id=810174 RO838_RS03785 WP_057682527.1 868031..869398(+) (rarA) [Xylella fastidiosa strain CFBP8478]
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLLAPDRALHRAVASGHVHSMILWGPPGCGKTTLSLLLAQY
IDAEFHAVSAVLSGLPEVRQMLAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDGQITADL
LSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALE
AWDIYERLGSPEGELAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIGYQYDHDAE
NGVALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDQLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1368 bp

>NTDB_id=810174 RO838_RS03785 WP_057682527.1 868031..869398(+) (rarA) [Xylella fastidiosa strain CFBP8478]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGCTCCTCTCTTGCAGCCACTGGCCGAGCGTAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGCTT
CCGGGCATGTGCATTCCATGATTTTGTGGGGACCTCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCAGTAC
ATTGATGCAGAATTTCATGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATGTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAAAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCCTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGGGCAGATAACCGCTGACTTG
CTTTCGCAAGTGCTTGCCGATCGTAGTCGTCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCA
CAAAAGTGTACGTAGTTCCAACCCGGATGCGGCGTTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGCGATCCTATCT
ACTTGGCGCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAG
GCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGAGCTGGCGTTCGCACAGTTGGTACTGTACTTGGCAAGTAC
TGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACCCAGGATGTTCCGC
TACACCTGCGTAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGGATATCAGTACGATCATGATGCTGAG
AACGGTGTTGCGCTGGAACAGACCTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAGCCAGTATCCCGCGGCCT
GGAGATTAAGCTGAAGGAGAAGTTGGACCAGTTGCGTGCAGCACGCGCTCAGATTCAAGCGGATAAGCCGCAGCGACCGC
GTGCATAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (194-271)

• MgsA AAA+ ATPase C terminal (MgsA_C) (273-438)

• ATPase family associated with various cellular activities (AAA) (AAA) (60-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.771	92.967	0.36