Detailed information NTG0810113

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RO839_RS03760
• Genome accession: NZ_CP135132
• Coordinates: 867873..869240 (+)
• Length: 455 a.a.
• NCBI ID: WP_057682527.1
• Uniprot ID: -
• Organism: Xylella fastidiosa strain CO33
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 862873..874240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RO839_RS03750 (RO839_03750)	-	864615..866525 (+)	1911	WP_020850921.1	DUF3857 domain-containing transglutaminase family protein	-
RO839_RS03755 (RO839_03755)	lolA	867087..867713 (+)	627	WP_004089126.1	outer membrane lipoprotein chaperone LolA	-
RO839_RS03760 (RO839_03760)	rarA	867873..869240 (+)	1368	WP_057682527.1	replication-associated recombination protein A	Machinery gene
RO839_RS03765 (RO839_03765)	crcB	869401..869802 (+)	402	WP_057682526.1	fluoride efflux transporter CrcB	-
RO839_RS03770 (RO839_03770)	-	870476..871972 (+)	1497	WP_057682524.1	ATP-binding protein	-
RO839_RS03775 (RO839_03775)	folK	872097..872612 (+)	516	WP_038229884.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
RO839_RS03780 (RO839_03780)	-	872623..873360 (-)	738	WP_057682523.1	pteridine reductase	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50632.85 Da
• Isoelectric Point: 6.7783

>NTDB_id=810113 RO839_RS03760 WP_057682527.1 867873..869240(+) (rarA) [Xylella fastidiosa strain CO33]
MTRQRFPTLQHDLLGVAPLLQPLAERMRPRTLHEMVGQKRLLAPDRALHRAVASGHVHSMILWGPPGCGKTTLSLLLAQY
IDAEFHAVSAVLSGLPEVRQMLAEAAQRFSEGRRTVLFVDEVHRFNKMQQDAFLPHIERGSIIFVGATTENPSFELNSAL
LSRCRVHVLEAVSSQDIVVALQRALQDTERGLGGQKIEVSEASLLEIAKAADGDVRRALTLLEIAAELAQDEDGQITADL
LSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPDAALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALE
AWDIYERLGSPEGELAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHLRNAPTRLMKSLGYGIGYQYDHDAE
NGVALEQTCFPDALGERIYYQPVSRGLEIKLKEKLDQLRAARAQIQADKPQRPRA

Nucleotide

• Length: 1368 bp

>NTDB_id=810113 RO839_RS03760 WP_057682527.1 867873..869240(+) (rarA) [Xylella fastidiosa strain CO33]
GTGACACGACAGCGCTTTCCGACTCTTCAGCATGATTTGCTTGGTGTGGCTCCTCTCTTGCAGCCACTGGCCGAGCGTAT
GCGTCCTCGTACTCTTCATGAGATGGTAGGACAGAAGCGCTTGCTTGCCCCAGATCGTGCATTGCATCGTGCGGTGGCTT
CCGGGCATGTGCATTCCATGATTTTGTGGGGACCTCCAGGGTGCGGCAAGACGACATTGTCATTGCTGTTAGCGCAGTAC
ATTGATGCAGAATTTCATGCAGTCTCGGCTGTTCTTTCGGGGTTGCCGGAGGTGCGTCAGATGTTGGCTGAGGCTGCGCA
GCGTTTTTCTGAAGGACGCCGCACCGTCTTGTTCGTGGACGAAGTGCATCGTTTTAACAAGATGCAGCAGGATGCGTTTC
TGCCGCATATCGAGCGTGGTTCCATTATTTTCGTTGGTGCCACTACTGAAAATCCATCCTTCGAATTGAACTCGGCGTTA
CTGTCGCGTTGCCGTGTCCACGTGTTGGAGGCAGTGTCCTCACAGGATATCGTTGTGGCATTGCAGCGGGCGTTGCAGGA
TACGGAGCGGGGTTTGGGTGGGCAGAAGATTGAAGTGTCTGAAGCCTCTCTGTTGGAGATTGCCAAGGCTGCAGATGGTG
ACGTGCGTCGTGCGCTCACCTTGTTGGAGATTGCTGCTGAGCTTGCCCAGGATGAGGATGGGCAGATAACCGCTGACTTG
CTTTCGCAAGTGCTTGCCGATCGTAGTCGTCGCTTCGACAAACGGGGGGAGCAGTTCTATGACCAGATTTCGGCCTTGCA
CAAAAGTGTACGTAGTTCCAACCCGGATGCGGCGTTGTATTGGTTGCTGCGTATGCTGGATGGTGGTTGCGATCCTATCT
ACTTGGCGCGGCGCTTGACCCGCATGGCGATTGAGGATATCGGTTTGGCTGATCCGCGTGCACAGTCGATGGCTCTGGAG
GCTTGGGACATCTATGAGCGGTTGGGTAGCCCGGAGGGAGAGCTGGCGTTCGCACAGTTGGTACTGTACTTGGCAAGTAC
TGCAAAATCGAATGCTGGCTATGTTGCGTTCAATGTGGCCAAGGAGGACATTCGCCAGACGGGTACCCAGGATGTTCCGC
TACACCTGCGTAATGCACCGACCAGACTCATGAAAAGTCTCGGTTACGGTATCGGATATCAGTACGATCATGATGCTGAG
AACGGTGTTGCGCTGGAACAGACCTGTTTTCCCGATGCGCTGGGGGAGCGTATTTACTACCAGCCAGTATCCCGCGGCCT
GGAGATTAAGCTGAAGGAGAAGTTGGACCAGTTGCGTGCAGCACGCGCTCAGATTCAAGCGGATAAGCCGCAGCGACCGC
GTGCATAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (194-271)

• MgsA AAA+ ATPase C terminal (MgsA_C) (273-438)

• ATPase family associated with various cellular activities (AAA) (AAA) (60-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.771	92.967	0.36