Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   QN329_RS06590 Genome accession   NZ_CP135103
Coordinates   1247868..1249607 (+) Length   579 a.a.
NCBI ID   WP_000323504.1    Uniprot ID   Q8DYY4
Organism   Streptococcus agalactiae strain HU36/21     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1242868..1254607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN329_RS06570 (QN329_06595) - 1243211..1244059 (+) 849 WP_000761620.1 DegV family protein -
  QN329_RS06575 (QN329_06600) - 1244244..1245452 (+) 1209 WP_001238954.1 CCA tRNA nucleotidyltransferase -
  QN329_RS06580 (QN329_06605) - 1245463..1247331 (+) 1869 WP_001279330.1 ABC-F family ATP-binding cassette domain-containing protein -
  QN329_RS06585 (QN329_06610) - 1247328..1247801 (+) 474 WP_000586888.1 GNAT family N-acetyltransferase -
  QN329_RS06590 (QN329_06615) rcrP 1247868..1249607 (+) 1740 WP_000323504.1 ABC transporter ATP-binding protein Regulator
  QN329_RS06595 (QN329_06620) rcrQ 1249612..1251381 (+) 1770 WP_001227939.1 ABC transporter ATP-binding protein Regulator
  QN329_RS06600 (QN329_06625) - 1251422..1251931 (-) 510 WP_000870953.1 HdeD family acid-resistance protein -
  QN329_RS06605 (QN329_06630) gdhA 1252099..1253448 (+) 1350 WP_000200443.1 NADP-specific glutamate dehydrogenase -
  QN329_RS06610 (QN329_06635) - 1253518..1253928 (+) 411 WP_000594937.1 peptide deformylase -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 64860.30 Da        Isoelectric Point: 6.2591

>NTDB_id=809945 QN329_RS06590 WP_000323504.1 1247868..1249607(+) (rcrP) [Streptococcus agalactiae strain HU36/21]
MAYIWSYLKRYPNWLWLDLLGAMLFVTVILGMPTALAGMIDNGVTKGDRTGVYLWTFIMFIFVVLGIIGRITMAYASSRL
TTTMIRDMRNDMYAKLQEYSHHEYEQIGVSSLVTRMTSDTFVLMQFAEMSLRLGLVTPMVMIFSVVMILITSPSLAWLVA
VAMPLLVGVILYVAIKTKPLSERQQTMLDKINQYVRENLTGLRVVRAFARENFQSQKFQVANQRYTDTSTGLFKLTGLTE
PLFVQIIIAMIVAIVWFALDPLQRGAIKIGDLVAFIEYSFHALFSFLLFANLFTMYPRMVVSSHRIREVMDMPISINPNT
EGVTDTKLKGHLEFDNVTFAYPGETESPVLHDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRD
YNLKSLRQKIGFIPQKALLFTGTIGENLKYGKADATIDDLRQAVDISQAKEFIESHQEAFETHLAEGGSNLSGGQKQRLS
IARAVVKDPDLYIFDDSFSALDYKTDATLRARLKEVTGDSTVLIVAQRVGTIMDADQIIVLDEGEIVGRGTHAQLIENNA
IYREIAESQLKNQNLSEGE

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=809945 QN329_RS06590 WP_000323504.1 1247868..1249607(+) (rcrP) [Streptococcus agalactiae strain HU36/21]
ATGGCATATATTTGGTCTTATTTGAAAAGGTACCCAAATTGGTTATGGCTTGATTTACTAGGAGCTATGCTTTTTGTGAC
GGTTATCCTAGGAATGCCCACAGCCTTAGCGGGTATGATTGATAATGGCGTTACAAAAGGTGATCGGACTGGAGTTTATC
TGTGGACGTTCATCATGTTTATATTTGTTGTACTAGGTATTATTGGGCGTATTACGATGGCTTACGCATCTAGTCGCTTA
ACGACAACAATGATTAGAGATATGCGTAATGATATGTATGCTAAGCTTCAAGAATACTCCCATCATGAATATGAACAGAT
AGGTGTATCTTCGCTAGTGACACGTATGACAAGCGATACTTTTGTTTTGATGCAATTTGCTGAAATGTCTTTACGTTTAG
GCCTAGTAACTCCTATGGTAATGATTTTTAGCGTGGTTATGATACTAATTACGAGTCCATCTTTGGCTTGGCTTGTAGCG
GTTGCGATGCCTCTTTTGGTAGGAGTTATTTTATATGTAGCTATAAAAACAAAACCTTTATCTGAAAGACAACAGACTAT
GCTTGATAAAATCAATCAATATGTTCGTGAAAATTTAACAGGGTTACGCGTTGTTAGGGCCTTTGCAAGAGAGAATTTTC
AATCACAAAAATTTCAAGTCGCTAACCAACGTTACACAGATACTTCAACTGGTCTTTTTAAATTAACAGGGCTAACAGAA
CCACTTTTCGTTCAAATTATTATTGCAATGATTGTGGCTATCGTTTGGTTTGCTTTGGATCCCTTACAAAGAGGTGCTAT
TAAAATAGGGGATTTAGTTGCTTTTATCGAATATAGCTTCCATGCTCTCTTTTCATTTTTGCTATTTGCCAATCTTTTTA
CTATGTATCCTCGTATGGTGGTATCTAGCCATCGTATTAGAGAGGTGATGGATATGCCAATCTCTATTAATCCTAATACC
GAAGGTGTTACGGATACGAAACTCAAAGGGCATTTAGAATTTGATAATGTAACATTCGCTTATCCAGGAGAAACAGAGAG
TCCCGTTTTGCATGATATTTCTTTTAAAGCTAAGCCTGGAGAAACAATTGCTTTTATTGGTTCAACAGGTTCAGGAAAAT
CTTCTCTTGTTAATTTGATTCCACGTTTTTATGATGTGACACTTGGAAAAATCTTAGTAGATGGAGTTGATGTAAGAGAT
TATAACCTTAAATCACTTCGCCAAAAGATTGGATTTATCCCCCAAAAAGCTCTTTTATTTACAGGGACAATAGGAGAGAA
TTTAAAATATGGAAAAGCTGATGCTACTATTGATGATCTTAGACAAGCGGTTGATATTTCTCAAGCTAAAGAGTTTATTG
AGAGTCACCAAGAAGCCTTTGAAACGCATTTAGCTGAAGGTGGGAGCAATCTTTCTGGGGGTCAAAAACAACGGTTATCT
ATTGCTAGGGCTGTTGTTAAAGATCCAGATTTATATATTTTTGATGATTCATTTTCTGCTCTCGATTATAAGACAGACGC
TACTTTAAGAGCGCGTCTAAAAGAAGTAACCGGTGATTCTACAGTTTTGATAGTTGCTCAAAGGGTGGGTACGATTATGG
ATGCTGATCAGATTATTGTCCTTGATGAAGGCGAAATTGTCGGTCGTGGTACCCACGCTCAATTAATAGAAAATAATGCT
ATTTATCGTGAAATCGCTGAGTCACAACTGAAGAACCAAAACTTATCAGAAGGAGAGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(30-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DYY4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.633

94.128

0.373