Detailed information NTG0809411

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: LLNCDO1820_RS11425
• Genome accession: NZ_CP120927
• Coordinates: 2237870..2238898 (-)
• Length: 342 a.a.
• NCBI ID: WP_010906347.1
• Uniprot ID: A0AAP4JQE3
• Organism: Lactococcus lactis subsp. lactis strain NCDO1820
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2232870..2243898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLNCDO1820_RS11400 (LLNCDO1820_11395)	-	2233156..2233653 (-)	498	WP_021214977.1	nitroreductase family protein	-
LLNCDO1820_RS11405 (LLNCDO1820_11400)	-	2233640..2233849 (-)	210	WP_003132661.1	hypothetical protein	-
LLNCDO1820_RS11410 (LLNCDO1820_11405)	-	2233846..2234673 (-)	828	WP_010906344.1	radical SAM protein	-
LLNCDO1820_RS11415 (LLNCDO1820_11410)	-	2234666..2236789 (-)	2124	WP_010906345.1	radical SAM protein	-
LLNCDO1820_RS11420 (LLNCDO1820_11415)	-	2236892..2237749 (-)	858	WP_010906346.1	transcriptional regulator	-
LLNCDO1820_RS11425 (LLNCDO1820_11420)	sepM	2237870..2238898 (-)	1029	WP_010906347.1	SepM family pheromone-processing serine protease	Regulator
LLNCDO1820_RS11430 (LLNCDO1820_11425)	coaD	2238885..2239382 (-)	498	WP_010906348.1	pantetheine-phosphate adenylyltransferase	-
LLNCDO1820_RS11435 (LLNCDO1820_11430)	rsmD	2239430..2239969 (-)	540	WP_015427191.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LLNCDO1820_RS11440 (LLNCDO1820_11435)	-	2240140..2241360 (-)	1221	WP_003132654.1	MFS transporter	-
LLNCDO1820_RS11445 (LLNCDO1820_11440)	lmrP	2241444..2242670 (-)	1227	WP_021214981.1	multidrug efflux MFS transporter LmrP	-
LLNCDO1820_RS11450 (LLNCDO1820_11445)	-	2242858..2243352 (+)	495	WP_010906351.1	RNA polymerase sigma factor	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37379.98 Da
• Isoelectric Point: 9.9183

>NTDB_id=809411 LLNCDO1820_RS11425 WP_010906347.1 2237870..2238898(-) (sepM) [Lactococcus lactis subsp. lactis strain NCDO1820]
MKKNKKINPKLKWGISIGLIVVALLALFYPTSYYVEMPGTTEPLGKMVKVEGKKDEHKGDFFLTTVQIARANLATMIYSH
FNSFTSIYSEQEMTGGLNDAQFNRVNQFYMETAQNTAIYQAFKLANKPYELKYEGVYVLDIAKNSTFKNKLELADTITAV
NGQQFTSSADMIAYVSKQKVGDSVTIEYTRIDGTKHKSTGKYIKIANGKTGIGISLVDHTEVVTTPKVTVNAGSIGGPSA
GMMFTLEIYSQLTGKDLRNGREIAGTGTIEHDGSIGQIGGVDKKVATASKEGAKVFLVPDSGTKKESSNNYLGAKTAAKK
LKTKMKIVPVKTIQDALDYLEK

Nucleotide

• Length: 1029 bp

>NTDB_id=809411 LLNCDO1820_RS11425 WP_010906347.1 2237870..2238898(-) (sepM) [Lactococcus lactis subsp. lactis strain NCDO1820]
ATGAAAAAAAATAAAAAAATTAATCCCAAATTAAAATGGGGAATCTCGATTGGTCTAATTGTTGTTGCCCTTTTAGCTTT
ATTTTATCCAACGAGTTACTATGTGGAAATGCCCGGAACAACCGAGCCTTTAGGGAAAATGGTCAAAGTTGAAGGCAAAA
AAGATGAACATAAAGGTGATTTTTTCCTGACGACTGTCCAAATTGCACGAGCAAATCTTGCTACAATGATTTACAGCCAT
TTTAATAGTTTTACAAGCATTTACAGTGAGCAAGAAATGACTGGTGGACTTAACGACGCACAGTTCAACCGTGTCAACCA
GTTTTACATGGAAACGGCACAGAATACAGCGATTTATCAAGCTTTTAAATTAGCTAATAAACCTTATGAACTTAAATATG
AAGGCGTTTATGTCCTTGATATTGCCAAAAATTCGACCTTTAAAAATAAGCTAGAACTTGCAGATACGATTACAGCAGTC
AATGGTCAACAGTTTACATCAAGTGCCGACATGATTGCTTATGTTTCCAAACAAAAAGTCGGTGATTCAGTAACGATTGA
ATACACGAGAATTGACGGCACAAAGCACAAGTCAACTGGCAAATACATCAAAATTGCTAATGGAAAAACAGGAATTGGGA
TCAGCCTAGTTGACCATACTGAAGTCGTGACGACTCCAAAAGTTACTGTCAACGCGGGTTCAATCGGTGGTCCCTCTGCG
GGGATGATGTTTACACTAGAAATTTACAGTCAGTTGACAGGAAAAGATTTGCGAAACGGTCGCGAAATTGCTGGAACTGG
AACGATTGAACATGACGGAAGCATTGGCCAAATCGGCGGTGTTGATAAAAAAGTAGCCACAGCGAGCAAAGAAGGGGCAA
AGGTCTTCTTAGTGCCTGACTCAGGCACCAAAAAGGAAAGCAGCAACAATTACCTTGGAGCCAAAACCGCAGCTAAAAAA
CTAAAAACGAAGATGAAAATCGTTCCCGTCAAAACTATTCAGGACGCTTTAGATTATTTAGAAAAATAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (134-194)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (227-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	48.696	100	0.491