Detailed information NTG0808862

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: P4829_RS13825
• Genome accession: NZ_CP120846
• Coordinates: 2725377..2727770 (-)
• Length: 797 a.a.
• NCBI ID: WP_063638590.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain MBLB1156
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2720377..2732770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P4829_RS13790 (P4829_13790)	-	2721434..2722162 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
P4829_RS13795 (P4829_13795)	-	2722194..2723012 (+)	819	WP_106046946.1	transporter substrate-binding domain-containing protein	-
P4829_RS13800 (P4829_13800)	-	2723074..2723724 (+)	651	WP_010789323.1	ABC transporter permease subunit	-
P4829_RS13805 (P4829_13805)	-	2723743..2724399 (+)	657	WP_003325316.1	amino acid ABC transporter permease	-
P4829_RS13810 (P4829_13810)	-	2724437..2724568 (-)	132	WP_003325315.1	YrzQ family protein	-
P4829_RS13815 (P4829_13815)	-	2724593..2724784 (-)	192	WP_003325314.1	hypothetical protein	-
P4829_RS13820 (P4829_13820)	-	2724797..2725261 (-)	465	WP_003325313.1	PRC-barrel domain-containing protein	-
P4829_RS13825 (P4829_13825)	recD2	2725377..2727770 (-)	2394	WP_063638590.1	ATP-dependent RecD-like DNA helicase	Machinery gene
P4829_RS13830 (P4829_13830)	-	2727804..2728424 (-)	621	WP_094233205.1	tetratricopeptide repeat protein	-
P4829_RS13835 (P4829_13835)	mnmA	2728515..2729630 (-)	1116	WP_063638591.1	tRNA 2-thiouridine(34) synthase MnmA	-
P4829_RS13840 (P4829_13840)	-	2729664..2730806 (-)	1143	WP_010789328.1	cysteine desulfurase family protein	-
P4829_RS13845 (P4829_13845)	cymR	2730825..2731241 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
P4829_RS13850 (P4829_13850)	-	2731443..2732711 (+)	1269	WP_063638592.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89120.76 Da
• Isoelectric Point: 5.0751

>NTDB_id=808862 P4829_RS13825 WP_063638590.1 2725377..2727770(-) (recD2) [Bacillus atrophaeus strain MBLB1156]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRGLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=808862 P4829_RS13825 WP_063638590.1 2725377..2727770(-) (recD2) [Bacillus atrophaeus strain MBLB1156]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTA
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTAAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATTGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCGTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTATTGGCTGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAATCGACCGGACTTCCGGCCGTGAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCGCAGGTCATTCC
GACAGTCAGGCTAACAGATATTTACCGGCAGGCAGAAGGTTCATCTATTGTGGAGCTTGCTCACGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTT
GAAAAGGTCGTCACCAATGCTCTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAACGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTATGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAGGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTCATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (345-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	91.97	100	0.92