Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   RMQ62_RS04635 Genome accession   NZ_CP135065
Coordinates   968821..971154 (-) Length   777 a.a.
NCBI ID   WP_254457645.1    Uniprot ID   -
Organism   Streptococcus suis strain ID24665     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 963821..976154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMQ62_RS04615 (RMQ62_04615) msrB 964651..965589 (-) 939 WP_105120228.1 peptide-methionine (R)-S-oxide reductase MsrB -
  RMQ62_RS04620 (RMQ62_04620) - 965629..967158 (-) 1530 WP_313680583.1 AMP-binding protein -
  RMQ62_RS04625 (RMQ62_04625) trxA 967299..967613 (-) 315 WP_012775426.1 thioredoxin -
  RMQ62_RS04630 (RMQ62_04630) - 968144..968797 (-) 654 WP_105119323.1 GNAT family N-acetyltransferase -
  RMQ62_RS04635 (RMQ62_04635) mutS/mutS2 968821..971154 (-) 2334 WP_254457645.1 endonuclease MutS2 Machinery gene
  RMQ62_RS04640 (RMQ62_04640) - 971495..972043 (-) 549 WP_002935945.1 CvpA family protein -
  RMQ62_RS04645 (RMQ62_04645) - 972040..972351 (-) 312 WP_002935948.1 hypothetical protein -
  RMQ62_RS04650 (RMQ62_04650) treR 972409..973122 (-) 714 WP_044683691.1 trehalose operon repressor Regulator
  RMQ62_RS04655 (RMQ62_04655) treP 973355..975349 (+) 1995 WP_313741860.1 PTS system trehalose-specific EIIBC component -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87553.15 Da        Isoelectric Point: 6.4820

>NTDB_id=808494 RMQ62_RS04635 WP_254457645.1 968821..971154(-) (mutS/mutS2) [Streptococcus suis strain ID24665]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYSNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKTKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSGVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAEPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDTIIQSAQSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDLALAESEEILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLAKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=808494 RMQ62_RS04635 WP_254457645.1 968821..971154(-) (mutS/mutS2) [Streptococcus suis strain ID24665]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTGGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CGCAGATTTTTGTGGAAAATCCCTATTTCAGTCTGGCTGCTACTAGTGACATTGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAGCTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATAG
TAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAAGGCTCCC
TCCAGTCCATCAATGATGCGGGGTTTGTAGAGGATTTTGCCTCTGAAAAACTAGCCCGTATTCGAAGAAAAATCCGTGAA
GCTGAAGACCAAGTTCGGCAGGTCATGCAGGATATTTTGAAGACCAAGGGTGACATGCTGTCCGATAGTATTTTAGCAAG
TCGTAATGGACGCAATGTCCTTCCTGTCAAAAATACCTATCGCAATAAGATTGCAGGGGTTGTCCATGACATTTCTGCTT
CTGGCTCGACTGTGTATATTGAACCGCGGGCAGTGGTGACCCTGAACGAAGAAATCAGTCACCTCCGAGCAGAAGAACGC
CACGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCACATAGTGGCGTGATTCGTAACAATGCATGGCT
TATCGGACATATTGATTTCGTCCGTGCCAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGGCATCCGCTCATTGCTGAGCCTGTACCAAATGACCTGTATTTCGGTAGTCAG
TTGACGGCTATTGTTATCACAGGTCCCAATACGGGTGGTAAGACCATTATGCTCAAGACCTTGGGATTAACGCACCTTAT
GGCTCAGTCTGGTTTGCCTATTTTGGCAGACAAGGGCAGTCGGGTGGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACCCACACGGTGCAGATTTTAGCGGAGGCGGAT
CAAGATTCCCTCATTCTCTTTGACGAGTTGGGAGCTGGGACCGATCCGCAGGAGGGTGCATCTTTGGCAATGGCTATTTT
GGATGACCTTCGTCTGAGGGGGATCAAGACCATGGCAACCACCCACTACCCTGAGCTTAAGGCCTACGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAATTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTAGGTCTATCTGATACTATTATCCAGTCAGCCCAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATTGAGAAATTGGAAAGCCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAACAAGAAAATTACAAGATGAATCGAGCCCTTCGTAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGTTTGGAAGCCAAGGAAATTGTCGATTTGGCGTTGGCAGAAAGCGAGGAGATTCTTAAAAATCTCCA
TGCTGCAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTGGACC
TGTCTAAGAACAAAGTCTTGAAAAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGCGATGACATTATCGTTACAGCTTAT
GGACAACGCGGCACCCTGACCAACCAGCTCAAGGACGGGCGTTGGGAAGCTCAGGTTGGTTTGATTAAGATGACCTTGGC
CAAAGATGAGTTTGAGTTAGTAAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGACCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCTATGATGGAGCTGGATGAATTTATC
GACCAAGCCCTTCTCAACAATCTGGCACAAGTCGACATTGTCCACGGTATTGGTACAGGGGTTATCCGAGAAGGGGTGAC
CAAGTACCTTCGCCGAAACAAGCAAGTCAAGGAGTTCGGTTATGCCCCACAAAATGCAGGTGGCTCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.52

100

0.403