Detailed information NTG0808436

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: RMQ63_RS06735
• Genome accession: NZ_CP135063
• Coordinates: 1382384..1384873 (-)
• Length: 829 a.a.
• NCBI ID: WP_254457640.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID32563
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1377384..1389873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMQ63_RS06710 (RMQ63_06710)	dinB	1378213..1379280 (+)	1068	WP_105134522.1	DNA polymerase IV	-
RMQ63_RS06715 (RMQ63_06715)	-	1379323..1379742 (+)	420	WP_105119313.1	Rrf2 family transcriptional regulator	-
RMQ63_RS06720 (RMQ63_06720)	-	1379879..1380505 (+)	627	WP_109371063.1	NAD(P)-dependent oxidoreductase	-
RMQ63_RS06725 (RMQ63_06725)	-	1380610..1381530 (+)	921	WP_254457639.1	1-phosphofructokinase family hexose kinase	-
RMQ63_RS06730 (RMQ63_06730)	-	1381578..1382216 (+)	639	WP_172699633.1	endonuclease III domain-containing protein	-
RMQ63_RS06735 (RMQ63_06735)	recD/recD2/recDB	1382384..1384873 (-)	2490	WP_254457640.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RMQ63_RS06740 (RMQ63_06740)	lepB	1385079..1385708 (-)	630	WP_053867265.1	signal peptidase I	-
RMQ63_RS06745 (RMQ63_06745)	rnhC	1385718..1386608 (-)	891	WP_024400395.1	ribonuclease HIII	-
RMQ63_RS06750 (RMQ63_06750)	-	1386693..1387676 (+)	984	WP_254457641.1	Gfo/Idh/MocA family protein	-
RMQ63_RS06755 (RMQ63_06755)	-	1388025..1389158 (+)	1134	WP_254457642.1	LysM domain-containing protein	-

Sequence

Protein

• Length: 829 a.a.
• Molecular weight: 92921.00 Da
• Isoelectric Point: 4.5732

>NTDB_id=808436 RMQ63_RS06735 WP_254457640.1 1382384..1384873(-) (recD/recD2/recDB) [Streptococcus suis strain ID32563]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVAGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSDHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSSKNRQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAHELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKNLTRLMGKNGFKPFPRADVEAA
IAELESMSSLTYDDIQKEAIVQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMSQALLNPLEDGELEFLHNEQAFRQGDRVIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVTYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILIGEISAFDYAV
KNAGTLRKTYLVPRFQGEMAEQDSKESLTENNESKTATATKTQPPAQSGKPKQTEPVTENSQQLSLLDQDQPEKTSLQPR
EYILTVDNLLTIDPMIGIDQADIEEFFKA

Nucleotide

• Length: 2490 bp

>NTDB_id=808436 RMQ63_RS06735 WP_254457640.1 1382384..1384873(-) (recD/recD2/recDB) [Streptococcus suis strain ID32563]
ATGAACGAAGTGTATTTTACCGGTACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAGATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGACGACTACGAAATTATTGTGGCCGGAACGATTGCCGATGTCATCGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAGCAGCTGCAAATTTCGCGTTACGAACGCAGC
AAGCCCACTTCTGCCGGACTTGTCAAGTATTTCTCCAGCGACCATTTCAAGGGAATTGGACGTAAAACAGCGGAAAAAAT
CGTTGAGCTCTATGGCGAGGATACCATTGATAAGATTTTAGCTGAACCTGAAAAACTAACCCAAATCACAGGACTATCCA
GCAAGAACAGGCAGGCATTTGTCGAAAAACTCCGCCTCAATTATGGAACCGAGCTGATCTTGGCAAAACTAGCTGAGTAT
GGCATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAGTATAAGGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGCCTCGGCTTCACCATTGCCGATAGGATTGCGGAAAACCTGGGAATTGCCAGCGATT
CCCCCCAACGCTTTCGGGCAGGTATGCTCTTTAGCCTCATCCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCAACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAACTGGACCCTGCCGCAGTTGCTCACGA
GTTGACAGGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGACAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATAAAAACTTGACCCGCCTGATGGGAAAAAATGGTTTCAAGCCCTTCCCACGCGCAGACGTTGAGGCTGCC
ATAGCAGAGCTGGAAAGTATGTCTTCCCTAACCTACGATGACATTCAAAAAGAAGCCATTGTCCAAGCTATTACCAATCC
GCTTTTCATTCTGACAGGTGGACCAGGGACTGGAAAAACAACGGTTATCAACGGTATTATCGCGGTCTATGCCATCTTGC
ATAAGATTGACCTGACTCGCAACCGAGAAGAATGCCCTGTCCTCCTAGCCGCTCCAACTGGACGAGCAGCCAGACGGATG
AATGAATTGACAGGTTTGCCTTCCGCCACCATCCACCGCCATCTCGGTCTGGTAGAAGGACAGGAAGAATCCTACCGTGA
TGATTATTTGGATGCCGACTTTATCATCGTGGATGAGTTTTCTATGGTAGATACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCCTCCCAAACCCAAGTCCTGATTGTCGGCGATGCGGAGCAATTGCCTTCTGTCAGTCCCGGTCAGGTCCTAGCT
GACCTCTTGAAAATTGACAAGCTACCCAGCATCACTCTGGAACGCATCTACCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGCCAAATCCGACAAGGAGCTCTACCTAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCGC
AAAACGAACAAATTCCAGCCCTGATTGAACGCATTGTCGGAGCAGCCATCAAGTCAGGTATCCCTGCAAACGAGGTCCAA
ATCCTCGCTCCCATGTACCGTGGTGCCGCAGGCATTGACCAACTTAACACCATGAGCCAGGCCCTGCTCAATCCCCTAGA
AGACGGAGAACTGGAGTTCCTCCACAACGAGCAAGCCTTCCGCCAAGGCGACCGGGTCATCCACCTAGTCAACGATGCCG
AGGCCAATGTCTTCAATGGTGATTTGGGCTACATCACCGACCTCCTGCCTGCCAAGTATACCGACTCCAAGCAGGACGAG
ATTACCATCAACTTCGATGGTAGCGAGGTCACCTATCCCCGTAACGAATGGTACAAGATTACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGCAGTGAGTTCCAGGTCGTCATCCTCCCCATCACACGCACCAGCCACCGCATGCTCCAGCGCA
ACCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAGCTCATCCTCATAGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGAACCCTCCGCAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGACAGCAAGGAAAG
CCTGACAGAAAACAACGAAAGCAAAACAGCTACAGCCACGAAAACCCAGCCACCTGCTCAATCGGGTAAGCCAAAACAAA
CAGAGCCAGTAACAGAAAACAGCCAGCAACTATCCCTTCTTGACCAAGACCAGCCAGAAAAAACAAGTCTCCAACCCAGA
GAATATATTCTGACCGTGGACAACCTGCTAACCATCGACCCCATGATTGGCATAGATCAGGCAGATATTGAAGAGTTTTT
TAAAGCATAA

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• AAA domain (AAA_30) (332-529)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.27	91.194	0.376