Detailed information NTG0808377

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: P3T49_RS13755
• Genome accession: NZ_CP120723
• Coordinates: 2720258..2722651 (-)
• Length: 797 a.a.
• NCBI ID: WP_277713660.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain NX-12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2715258..2727651

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3T49_RS13720	-	2716316..2717044 (+)	729	WP_277713659.1	amino acid ABC transporter ATP-binding protein	-
P3T49_RS13725	-	2717067..2717894 (+)	828	WP_010789322.1	transporter substrate-binding domain-containing protein	-
P3T49_RS13730	-	2717956..2718606 (+)	651	WP_106270879.1	amino acid ABC transporter permease	-
P3T49_RS13735	-	2718625..2719281 (+)	657	WP_003325316.1	amino acid ABC transporter permease	-
P3T49_RS13740	-	2719318..2719449 (-)	132	WP_003325315.1	YrzQ family protein	-
P3T49_RS13745	-	2719474..2719665 (-)	192	WP_003325314.1	hypothetical protein	-
P3T49_RS13750	-	2719678..2720142 (-)	465	WP_061572696.1	PRC-barrel domain-containing protein	-
P3T49_RS13755	recD2	2720258..2722651 (-)	2394	WP_277713660.1	ATP-dependent RecD-like DNA helicase	Machinery gene
P3T49_RS13760	-	2722685..2723305 (-)	621	WP_094233205.1	tetratricopeptide repeat protein	-
P3T49_RS13765	mnmA	2723396..2724511 (-)	1116	WP_061572694.1	tRNA 2-thiouridine(34) synthase MnmA	-
P3T49_RS13770	-	2724545..2725687 (-)	1143	WP_268367770.1	cysteine desulfurase family protein	-
P3T49_RS13775	cymR	2725706..2726122 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
P3T49_RS13780	-	2726324..2727592 (+)	1269	WP_277714842.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89189.91 Da
• Isoelectric Point: 5.1712

>NTDB_id=808377 P3T49_RS13755 WP_277713660.1 2720258..2722651(-) (recD2) [Bacillus atrophaeus strain NX-12]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAVEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=808377 P3T49_RS13755 WP_277713660.1 2720258..2722651(-) (recD2) [Bacillus atrophaeus strain NX-12]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGGAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCCCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCAGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCTGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCGTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTATTGGCCGCACCGACAGGAAGAGCCGCAAAACGAATGAGTGAATCGACCGGACTTCCGGCCGTGAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTGGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCGCAGGTCATTCC
GACAGTCAGGCTGACAGATATTTACCGGCAGGCAGAAGGTTCATCTATTGTGGAGCTTGCTCACGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCACCCACCAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTC
GAAAAGGTCGTCACCAATGCGTTGAAAAAGGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAAGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTTGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGTGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTCATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	91.97	100	0.92