Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   P5647_RS07455 Genome accession   NZ_CP120622
Coordinates   1423877..1424341 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain DSM 1090     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1418877..1429341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5647_RS07435 (P5647_07435) kinA 1419343..1421163 (+) 1821 WP_277687289.1 sporulation histidine kinase KinA -
  P5647_RS07440 (P5647_07440) dapX 1421174..1422355 (-) 1182 WP_003232415.1 aminotransferase A -
  P5647_RS07445 (P5647_07445) - 1422557..1422718 (-) 162 WP_003245246.1 hypothetical protein -
  P5647_RS07450 (P5647_07450) cheV 1422922..1423833 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  P5647_RS07455 (P5647_07455) kre 1423877..1424341 (-) 465 WP_003232406.1 YkyB family protein Regulator
  P5647_RS07460 (P5647_07460) ykuC 1424467..1425759 (-) 1293 WP_003245267.1 MFS transporter -
  P5647_RS07465 (P5647_07465) ltdD 1425835..1426329 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  P5647_RS07470 (P5647_07470) ppeE 1426386..1427246 (-) 861 WP_003232400.1 metallophosphoesterase -
  P5647_RS07475 (P5647_07475) fadH 1427389..1428153 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=807124 P5647_RS07455 WP_003232406.1 1423877..1424341(-) (kre) [Bacillus subtilis strain DSM 1090]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=807124 P5647_RS07455 WP_003232406.1 1423877..1424341(-) (kre) [Bacillus subtilis strain DSM 1090]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1