Detailed information NTG0805941

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: P3L57_RS13445
• Genome accession: NZ_CP120511
• Coordinates: 2701913..2704309 (-)
• Length: 798 a.a.
• NCBI ID: WP_059293517.1
• Uniprot ID: A0A9Q2LN59
• Organism: Bacillus sp. B28
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2696913..2709309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3L57_RS13410 (P3L57_13410)	-	2697982..2698710 (+)	729	WP_069487132.1	amino acid ABC transporter ATP-binding protein	-
P3L57_RS13415 (P3L57_13415)	-	2698733..2699554 (+)	822	WP_069487131.1	transporter substrate-binding domain-containing protein	-
P3L57_RS13420 (P3L57_13420)	-	2699618..2700268 (+)	651	WP_044154313.1	amino acid ABC transporter permease	-
P3L57_RS13425 (P3L57_13425)	-	2700285..2700941 (+)	657	WP_044154312.1	amino acid ABC transporter permease	-
P3L57_RS13430 (P3L57_13430)	-	2700975..2701106 (-)	132	WP_024122308.1	YrzQ family protein	-
P3L57_RS13435 (P3L57_13435)	-	2701128..2701319 (-)	192	WP_010335110.1	hypothetical protein	-
P3L57_RS13440 (P3L57_13440)	-	2701331..2701810 (-)	480	WP_254501066.1	PRC-barrel domain-containing protein	-
P3L57_RS13445 (P3L57_13445)	recD2	2701913..2704309 (-)	2397	WP_059293517.1	ATP-dependent RecD-like DNA helicase	Machinery gene
P3L57_RS13450 (P3L57_13450)	-	2704334..2704990 (-)	657	WP_139127443.1	tetratricopeptide repeat protein	-
P3L57_RS13455 (P3L57_13455)	mnmA	2705038..2706153 (-)	1116	WP_059293515.1	tRNA 2-thiouridine(34) synthase MnmA	-
P3L57_RS13460 (P3L57_13460)	-	2706182..2707324 (-)	1143	WP_059293514.1	cysteine desulfurase family protein	-
P3L57_RS13465 (P3L57_13465)	cymR	2707344..2707760 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
P3L57_RS13470 (P3L57_13470)	-	2707962..2709227 (+)	1266	WP_059293513.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 88967.53 Da
• Isoelectric Point: 4.9855

>NTDB_id=805941 P3L57_RS13445 WP_059293517.1 2701913..2704309(-) (recD2) [Bacillus sp. B28]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAADGQRITEMDAANAMIALGENKDIVIEDERCYFPSLFFAEQNVAKRVKQIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGASLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=805941 P3L57_RS13445 WP_059293517.1 2701913..2704309(-) (recD2) [Bacillus sp. B28]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCATTTCAAAAAGGAGATCCCGACAACAAAAGAAGGTGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTGAAAAAACTGGGTGACAGTGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCCAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCTTTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGGTTCGGCCCTCAGCTGTCTATGAAAATCTATCAGGCCTATGAATC
CGAGACGCTGGAGAAAATTCAGGAAAACCCTTATCAGCTTGTGAGAGACGTGGAAGGCATAGGCTTTGGAAAAGCAGATG
AGCTTGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGATAAAAGCGGCTATTTTGTACACGCTTGAAACGACA
TGCCTTTCAGAAGGGCATACGTACATAGAAACGAAGCAGCTGATTATCGAAACCCAAACGCTGTTAAATCAGTCAGCGGC
AGATGGACAGCGCATTACAGAAATGGATGCCGCTAATGCAATGATTGCGCTTGGAGAAAATAAGGATATTGTCATTGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTTGCAAAGCGTGTGAAACAGATCGCAAGCCAAACC
GAATATGACGACCAGTTTCCTGAATCAGAATTCCTTCTGGCTTTAGGAGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCACCGATGCTTCTTTTAACGGGAGGGCCGGGTACCGGTAAAA
CAACGGTCATCAGAGGCATTGTAGAATTGTATGGAGAACTCCACGGTGCTTCACTCGATCCGTCGGATTATAAAAAAGAT
GAAGCTTTTCCGATTGTGCTGGCCGCGCCTACAGGTAGAGCGGCGAAACGAATGAGTGAGTCAACGGGTCTTCCGGCGGT
TACGATACACCGGCTGCTCGGGTGGAATGGCGCGGAAGGATTTACTCATACAGAGGACCAGCCGATTGAAGGGAAGCTTT
TAATTATCGATGAAGCGAGTATGCTTGATATATGGCTTGCGAATCATTTGTTCAAAGCGATCCCTGACCATATTCAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACCGTAAGACTGACCGACATCTACCGGCAAGCGGAAGGATCGTCGATTGTCGAGCTTGCCCACGAGATGAAAAATG
GGCTGCTTCCAAACAACCTGACGGCCCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATACAGGTCCTCGCCCCAATGTACAGAGG
GAAAGCCGGAATCAATGAGCTGAATGTGATGCTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGTGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAT
ATTGGAGAAATCACTTCAATTTTCTATGCGAAGGAAAATACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCTGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACCGCCATCACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCATTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTTGCGGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGGAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (346-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	96.11	99.875	0.96