Detailed information NTG0804470

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RKV28_RS08995
• Genome accession: NZ_CP134534
• Coordinates: 1804860..1806134 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102729.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KNIH_5618
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1799860..1811134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKV28_RS08965	mnmA	1800062..1801180 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
RKV28_RS08970	-	1801181..1802323 (-)	1143	WP_000409157.1	cysteine desulfurase family protein	-
RKV28_RS08975	-	1802635..1803648 (+)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
RKV28_RS08980	-	1803885..1804031 (-)	147	WP_000009238.1	SAS049 family protein	-
RKV28_RS08985	-	1804071..1804253 (-)	183	WP_000752909.1	CsbD family protein	-
RKV28_RS08990	cymR	1804353..1804775 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
RKV28_RS08995	rarA	1804860..1806134 (+)	1275	WP_000102729.1	replication-associated recombination protein A	Machinery gene
RKV28_RS09000	-	1806295..1807068 (-)	774	WP_000682646.1	ThiF family adenylyltransferase	-
RKV28_RS09005	-	1807068..1807196 (-)	129	WP_001790559.1	hypothetical protein	-
RKV28_RS09015	aspS	1807529..1809295 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
RKV28_RS09020	hisS	1809311..1810573 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47222.80 Da
• Isoelectric Point: 8.3526

>NTDB_id=804470 RKV28_RS08995 WP_000102729.1 1804860..1806134(+) (rarA) [Staphylococcus aureus strain KNIH_5618]
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=804470 RKV28_RS08995 WP_000102729.1 1804860..1806134(+) (rarA) [Staphylococcus aureus strain KNIH_5618]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684