Detailed information NTG0804349

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RKV27_RS05855
• Genome accession: NZ_CP134533
• Coordinates: 1124907..1126181 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102735.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KNIH_5844
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1119907..1131181

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKV27_RS05830	hisS	1120468..1121730 (+)	1263	WP_000590824.1	histidine--tRNA ligase	-
RKV27_RS05835	aspS	1121746..1123512 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
RKV27_RS05845	-	1123845..1123973 (+)	129	WP_031824596.1	hypothetical protein	-
RKV27_RS05850	-	1123973..1124746 (+)	774	WP_000682646.1	ThiF family adenylyltransferase	-
RKV27_RS05855	rarA	1124907..1126181 (-)	1275	WP_000102735.1	replication-associated recombination protein A	Machinery gene
RKV27_RS05860	cymR	1126266..1126688 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
RKV27_RS05865	-	1126788..1126970 (+)	183	WP_000752909.1	CsbD family protein	-
RKV27_RS05870	-	1127010..1127156 (+)	147	WP_000009237.1	SAS049 family protein	-
RKV27_RS05875	-	1127392..1128405 (-)	1014	WP_000985872.1	LLM class flavin-dependent oxidoreductase	-
RKV27_RS05880	-	1128717..1129859 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
RKV27_RS05885	mnmA	1129860..1130978 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47250.81 Da
• Isoelectric Point: 8.3539

>NTDB_id=804349 RKV27_RS05855 WP_000102735.1 1124907..1126181(-) (rarA) [Staphylococcus aureus strain KNIH_5844]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=804349 RKV27_RS05855 WP_000102735.1 1124907..1126181(-) (rarA) [Staphylococcus aureus strain KNIH_5844]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684