Detailed information NTG0804292

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: RKV26_RS08460
• Genome accession: NZ_CP134532
• Coordinates: 1720039..1721313 (+)
• Length: 424 a.a.
• NCBI ID: WP_228587310.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain KNIH_6268
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1715039..1726313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKV26_RS08430	mnmA	1715241..1716359 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
RKV26_RS08435	-	1716360..1717502 (-)	1143	WP_000409167.1	cysteine desulfurase family protein	-
RKV26_RS08440	-	1717814..1718827 (+)	1014	WP_000985895.1	LLM class flavin-dependent oxidoreductase	-
RKV26_RS08445	-	1719064..1719210 (-)	147	WP_000009237.1	SAS049 family protein	-
RKV26_RS08450	-	1719250..1719432 (-)	183	WP_000752909.1	CsbD family protein	-
RKV26_RS08455	cymR	1719532..1719954 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
RKV26_RS08460	rarA	1720039..1721313 (+)	1275	WP_228587310.1	replication-associated recombination protein A	Machinery gene
RKV26_RS08465	-	1721474..1722247 (-)	774	WP_259352137.1	tRNA threonylcarbamoyladenosine dehydratase	-
RKV26_RS08470	-	1722247..1722375 (-)	129	WP_001790559.1	hypothetical protein	-
RKV26_RS08480	aspS	1722708..1724474 (-)	1767	WP_267815052.1	aspartate--tRNA ligase	-
RKV26_RS08485	hisS	1724490..1725752 (-)	1263	WP_117224392.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47236.78 Da
• Isoelectric Point: 8.3539

>NTDB_id=804292 RKV26_RS08460 WP_228587310.1 1720039..1721313(+) (rarA) [Staphylococcus aureus strain KNIH_6268]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHAGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=804292 RKV26_RS08460 WP_228587310.1 1720039..1721313(+) (rarA) [Staphylococcus aureus strain KNIH_6268]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCCAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGCGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTTAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686