Detailed information NTG0803781

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: RJW55_RS01205
• Genome accession: NZ_CP134473
• Coordinates: 233585..236077 (-)
• Length: 830 a.a.
• NCBI ID: WP_172045791.1
• Uniprot ID: -
• Organism: Streptococcus suis strain TMW_SS028
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 228585..241077

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW55_RS01175 (RJW55_01175)	-	228933..229559 (+)	627	WP_172045787.1	NAD(P)H-binding protein	-
RJW55_RS01180 (RJW55_01180)	-	229661..230581 (+)	921	WP_029173011.1	1-phosphofructokinase family hexose kinase	-
RJW55_RS01185 (RJW55_01185)	-	230588..230809 (-)	222	Protein_201	transposase	-
RJW55_RS11545	-	231024..231095 (+)	72	WP_231640516.1	hypothetical protein	-
RJW55_RS01195 (RJW55_01195)	-	231366..232394 (+)	1029	WP_172045789.1	LPXTG cell wall anchor domain-containing protein	-
RJW55_RS01200 (RJW55_01200)	-	232808..233479 (-)	672	WP_099833222.1	hypothetical protein	-
RJW55_RS01205 (RJW55_01205)	recD/recD2/recDB	233585..236077 (-)	2493	WP_172045791.1	ATP-dependent RecD-like DNA helicase	Machinery gene
RJW55_RS01210 (RJW55_01210)	lepB	236603..237232 (-)	630	WP_172045792.1	signal peptidase I	-
RJW55_RS01215 (RJW55_01215)	rnhC	237243..238133 (-)	891	WP_172045793.1	ribonuclease HIII	-
RJW55_RS01220 (RJW55_01220)	-	238218..239201 (+)	984	WP_172045794.1	Gfo/Idh/MocA family protein	-
RJW55_RS01225 (RJW55_01225)	-	239689..240819 (+)	1131	WP_043027000.1	LysM domain-containing protein	-

Sequence

Protein

• Length: 830 a.a.
• Molecular weight: 93306.60 Da
• Isoelectric Point: 4.5664

>NTDB_id=803781 RJW55_RS01205 WP_172045791.1 233585..236077(-) (recD/recD2/recDB) [Streptococcus suis strain TMW_SS028]
MNEVYFTGTIDRIIFENPSNFYKILLLEIEETDADYDDYEIIVTGTIADVIEGEDYRFYGNLVTHPKYGQQLQISRYERS
KPTSAGLVKYFSSEHFKGIGRKTAEKIVELYGEDTIDKILAEPEKLTQITGLSRKNMQAFVEKLRLNYGTELILAKLAEY
GIPNKLAFQIQDQYKEKTLQIIEENPYQLVEDVQGLGFTIADRIAENLGIASDSPQRFRAGMLFSLIHRSMETGDTYVEA
RDLLEATLELLEKSRHTELDPAAVAHELTGLIADDKVQQEGTKIFDNSLYFAEHGIHKNLTRLMGKNGFKPFPRADVEAA
IAELETMSSLTYDDIQKEAIIQAITNPLFILTGGPGTGKTTVINGIIAVYAILHKIDLTRNREECPVLLAAPTGRAARRM
NELTGLPSATIHRHLGLVEGQEESYRDDYLDADFIIVDEFSMVDTWLANQLFQNISSQTQVLIVGDAEQLPSVSPGQVLA
DLLKIDKLPSITLERIYRQSDDSTIVTLASQIRQGALPSDFREKKADRSYFEAQNEQIPALIERIVGAAIKSGIPANEVQ
ILAPMYRGAAGIDQLNTMTQALLNPLEEGELEFLHNEQAFRQGDRIIHLVNDAEANVFNGDLGYITDLLPAKYTDSKQDE
ITINFDGSEVSYPRNEWYKITLAYAMSIHKSQGSEFQVVILPITRTSHRMLQRNLVYTAITRSKSKLILLGEISAFDYAV
KNAGTVRKTYLVPRFQGEMAEQDSKEALAEKVESKTATTTQTLPPTQPDRKEQVEAVKENNQQLSLLDQDQPEKTSAQPT
EYILTVDNLLTIDPMTGIEQADIEEFFRKI

Nucleotide

• Length: 2493 bp

>NTDB_id=803781 RJW55_RS01205 WP_172045791.1 233585..236077(-) (recD/recD2/recDB) [Streptococcus suis strain TMW_SS028]
ATGAACGAAGTGTATTTTACCGGCACTATTGACCGGATTATTTTTGAAAATCCTAGTAATTTTTATAAAATCCTTCTCCT
TGAAATCGAGGAGACAGACGCAGACTATGATGACTACGAAATTATTGTGACCGGAACGATTGCCGATGTCATTGAAGGAG
AAGACTATCGTTTCTATGGCAATCTGGTCACCCATCCCAAGTATGGTCAACAGCTGCAAATTTCGCGTTACGAACGCAGC
AAGCCCACTTCTGCTGGTCTGGTTAAGTATTTCTCCAGCGAGCATTTCAAGGGAATCGGTCGCAAAACGGCCGAAAAAAT
TGTTGAGCTCTATGGCGAAGATACCATTGATAAGATTTTAGCTGAACCTGAAAAACTAACCCAAATCACAGGTCTATCCC
GCAAGAACATGCAGGCATTTGTCGAAAAACTCCGCCTCAATTATGGAACCGAGCTGATCTTGGCAAAACTAGCTGAGTAT
GGTATTCCCAATAAATTGGCCTTTCAAATCCAAGACCAATATAAAGAAAAAACACTTCAGATTATTGAAGAAAATCCCTA
TCAACTGGTCGAAGATGTCCAGGGGCTCGGCTTTACCATTGCCGATAGGATTGCGGAAAACCTGGGAATTGCCAGTGATT
CACCCCAACGTTTTCGGGCTGGCATGCTCTTTAGCCTCATCCATCGCTCCATGGAAACAGGCGATACCTATGTGGAGGCC
AGAGACTTGCTGGAAGCTACCCTTGAACTGCTGGAAAAATCCCGCCATACAGAACTGGACCCCGCTGCTGTTGCCCACGA
GTTAACAGGACTGATTGCAGACGACAAGGTACAGCAAGAAGGCACAAAGATTTTTGATAACAGCCTCTACTTTGCCGAAC
ATGGTATCCATAAAAACCTGACCCGCCTGATGGGAAAAAATGGTTTCAAACCCTTCCCACGCGCAGACGTCGAGGCTGCC
ATAGCAGAGCTGGAAACCATGTCTTCCCTGACCTACGATGACATTCAAAAAGAAGCCATCATCCAAGCCATTACCAATCC
GCTTTTCATTCTGACAGGCGGACCAGGGACTGGAAAAACAACGGTTATCAACGGTATTATCGCCGTCTATGCCATCTTGC
ATAAGATTGACCTAACTCGCAACCGAGAAGAATGCCCTGTCCTTCTTGCCGCTCCAACTGGACGAGCAGCCAGACGAATG
AATGAGTTGACAGGTCTACCTTCCGCCACCATCCACCGCCACCTCGGTCTGGTAGAAGGACAAGAAGAATCCTACCGTGA
TGATTATTTGGATGCCGACTTCATCATCGTGGATGAGTTTTCTATGGTCGACACTTGGTTGGCAAACCAGCTCTTCCAGA
ACATCTCCTCCCAAACCCAAGTTTTGATTGTTGGCGATGCGGAGCAATTACCTTCCGTCAGTCCCGGTCAGGTCCTTGCT
GACCTCTTGAAAATTGACAAGCTACCCAGCATCACTCTAGAGCGCATCTATCGTCAATCCGATGATTCGACCATTGTTAC
CCTAGCCAGTCAGATTCGCCAAGGGGCTCTGCCGAGCGATTTCCGTGAGAAAAAGGCTGACCGCTCCTATTTTGAAGCCC
AAAACGAACAAATTCCAGCCCTGATTGAGCGCATTGTCGGCGCAGCTATCAAGTCGGGCATTCCTGCAAACGAAGTCCAA
ATCCTCGCTCCCATGTACCGTGGTGCAGCAGGTATTGACCAACTCAACACCATGACCCAGGCCCTGCTCAATCCACTGGA
AGAGGGAGAGTTAGAATTCCTCCATAACGAGCAAGCCTTCCGCCAAGGCGACCGGATCATTCATCTAGTCAACGACGCCG
AGGCCAATGTCTTCAATGGTGATTTGGGCTACATCACCGACCTCCTGCCTGCCAAGTACACCGACTCCAAGCAGGACGAG
ATTACCATCAACTTCGACGGTAGCGAGGTCTCCTATCCACGCAATGAATGGTACAAGATTACCCTGGCCTATGCCATGTC
CATCCACAAGTCCCAAGGCAGCGAGTTTCAGGTCGTCATCCTTCCCATCACGCGCACCAGCCACCGCATGCTCCAGCGTA
ACCTGGTCTACACCGCCATCACCCGCTCCAAGAGCAAACTCATCCTCCTAGGCGAAATCTCCGCCTTCGACTACGCCGTC
AAAAACGCCGGCACCGTCCGCAAAACCTATCTGGTCCCACGTTTCCAAGGGGAAATGGCAGAGCAGGATAGCAAGGAAGC
TTTAGCTGAAAAAGTCGAAAGCAAAACAGCTACAACCACGCAAACCCTGCCCCCTACTCAGCCAGACAGGAAAGAACAGG
TTGAAGCAGTCAAAGAAAACAACCAACAACTCTCCCTTCTTGACCAAGACCAGCCAGAAAAAACAAGTGCCCAACCCACA
GAATACATTTTGACTGTAGATAACCTACTAACCATCGACCCCATGACTGGCATAGAACAGGCAGATATTGAAGAATTTTT
CAGGAAAATATAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (663-710)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• AAA domain (AAA_30) (332-529)

• Helix-hairpin-helix domain (HHH_5) (97-145)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (575-645)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	41.492	92.048	0.382